| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr3g008960.1 |
| Family | GH5 |
| Protein Properties | Length: 490 Molecular Weight: 56160.1 Isoelectric Point: 7.1559 |
| Chromosome | Chromosome/Scaffold: 3 Start: 1723386 End: 1728922 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 206 | 474 | 0 |
| QVMREHWNSYITEDDFRFMSQNGLDAVRIPVGWWIAQDPNPPKPFVGGALAALDNAFTWAYKHGMKVIVDLHAVEGSQNGFEHSGTRDGYTEWGYSYIPQ TVSVIEFLAKRYSHRKSLGGIELMNEPLGVNLDSLKNYYREAYDVVRKYIPNTYVIMSNPLATDSKLLLSFVKGFDKVVLDVHYYNLYSDKFNGMNVQQN IDYIRNDRAWDLSGVSSSNALSFVGEWTAEWSIQGAPMQDYQRYVQAQMDVYSHATFGWAYWAYKCQYN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 490 Download |
| MEYRKYYLSF LLALCISCPH SLSFAYKAVN LGNWLVAEGW MEPSRFDGIV NKDLLDGTQV 60 QFMSRKFQTY LSAEDGGGTT IVANRGSASG WETFRLWRVS DSSFNFRVFN KKFVGQGEGH 120 QIVANSNSPS NHETFQIIRN KNEPLKIRIK ASNGLFWRVQ SKTSVIADYQ GTNWDDNDPS 180 VFHMTIVNTL QGEYQLTNGY GNRAPQVMRE HWNSYITEDD FRFMSQNGLD AVRIPVGWWI 240 AQDPNPPKPF VGGALAALDN AFTWAYKHGM KVIVDLHAVE GSQNGFEHSG TRDGYTEWGY 300 SYIPQTVSVI EFLAKRYSHR KSLGGIELMN EPLGVNLDSL KNYYREAYDV VRKYIPNTYV 360 IMSNPLATDS KLLLSFVKGF DKVVLDVHYY NLYSDKFNGM NVQQNIDYIR NDRAWDLSGV 420 SSSNALSFVG EWTAEWSIQG APMQDYQRYV QAQMDVYSHA TFGWAYWAYK CQYNHWSLKW 480 LIENGYIKL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 6.0e-5 | 104 | 169 | 67 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| cd00257 | Fascin | 4.0e-5 | 68 | 156 | 89 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 4.0e-17 | 211 | 469 | 273 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 2.0e-29 | 211 | 486 | 319 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ADD09589.1 | 0 | 6 | 489 | 14 | 504 | unknown [Trifolium repens] |
| EMBL | CAN74231.1 | 0 | 27 | 489 | 144 | 607 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI18831.1 | 0 | 27 | 489 | 36 | 505 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33033.1 | 0 | 27 | 489 | 36 | 505 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33035.1 | 0 | 14 | 470 | 15 | 486 | unnamed protein product [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3n9k_A | 7e-36 | 193 | 485 | 50 | 381 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 1eqp_A | 9e-36 | 193 | 485 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 2pb1_A | 1e-35 | 193 | 485 | 51 | 382 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
| PDB | 1eqc_A | 1e-35 | 193 | 485 | 45 | 376 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
| PDB | 1cz1_A | 1e-35 | 193 | 485 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
