| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr3g009010.1 |
| Family | GH5 |
| Protein Properties | Length: 563 Molecular Weight: 64202.3 Isoelectric Point: 6.3611 |
| Chromosome | Chromosome/Scaffold: 3 Start: 1744747 End: 1751439 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 256 | 548 | 1.12104e-44 |
| HMTNVNTLQGEYQLTNGYGNRAPQVMREHWNLYITEDDFRFMSQNGLDAVRIPVGWWIAQDPNPPKPFVGGALAALDNAFTWAYRHGMKVIVDLHAIEGS QNGFEHSGTRDGYTEWDDSYIPQTVSVIEFLAKRYNNRKSLGGIELMNEPLGVNQDSLKNYYKLAYDVVRKYIPNTYVIMSNPLATDSKLLLSFVKGFDK VVLDVHYYNMFWDKFNGMNVQQNIDFIRNDRAGDLSGFSSSNALSFVGEWTAEWSIQGASMQDYQRYVQTQMDVYSRATFGWAFWSYKCQNNK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 563 Download |
| MAYPALENNG SNTYMATHHE HKNKDEKSLF LIPQCAYSNI FEKIVEEDTT KASSEAINSA 60 LGDSQLRIIQ KMEYRKYYLS FLLALCISCL HSLSFAYKAV NLGNWLVAEG WMEPSRFDGI 120 VNKDLLDGTQ VQFMSRKFQT YLCAENGGGT TIVADRSSPS GWETFRLWRV SDSSFNFRVF 180 NKKFVGLNTI GGSTIVSFSG SPSNLETFQI IRNNDDPLKI RIKASNGLFL QVQSKTSVIA 240 DYQGTNWDDN DPSVFHMTNV NTLQGEYQLT NGYGNRAPQV MREHWNLYIT EDDFRFMSQN 300 GLDAVRIPVG WWIAQDPNPP KPFVGGALAA LDNAFTWAYR HGMKVIVDLH AIEGSQNGFE 360 HSGTRDGYTE WDDSYIPQTV SVIEFLAKRY NNRKSLGGIE LMNEPLGVNQ DSLKNYYKLA 420 YDVVRKYIPN TYVIMSNPLA TDSKLLLSFV KGFDKVVLDV HYYNMFWDKF NGMNVQQNID 480 FIRNDRAGDL SGFSSSNALS FVGEWTAEWS IQGASMQDYQ RYVQTQMDVY SRATFGWAFW 540 SYKCQNNKWS LKWLIENGYI KL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 0.009 | 175 | 242 | 68 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| cd00257 | Fascin | 7.0e-5 | 139 | 230 | 92 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 2.0e-19 | 284 | 542 | 268 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 5.0e-29 | 248 | 559 | 353 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ADD09589.1 | 0 | 77 | 562 | 6 | 504 | unknown [Trifolium repens] |
| EMBL | CAN74231.1 | 0 | 69 | 562 | 98 | 607 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI18831.1 | 0 | 98 | 562 | 36 | 505 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33033.1 | 0 | 98 | 562 | 36 | 505 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33035.1 | 0 | 85 | 543 | 15 | 486 | unnamed protein product [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 3e-33 | 252 | 558 | 26 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqc_A | 3e-33 | 252 | 558 | 26 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1cz1_A | 3e-33 | 252 | 558 | 26 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
| PDB | 2pc8_A | 3e-33 | 252 | 558 | 32 | 382 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
| PDB | 2pbo_A | 3e-33 | 252 | 558 | 32 | 382 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
