| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr3g009020.1 |
| Family | GH5 |
| Protein Properties | Length: 492 Molecular Weight: 55763.5 Isoelectric Point: 6.0974 |
| Chromosome | Chromosome/Scaffold: 3 Start: 1754655 End: 1758270 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 192 | 455 | 0 |
| LREHWNSYITEDDFRFMSQNGLDAVRIPVGWWIAYDPNPPKPFVGGSLAALDNAFTWAQNHEMKVIVDLHAVEGSQNGNEHSGTRDGYTEWGDSYIPQTV AVIDFLAQRYGNKPSLGGIELMNEPQGVNLDSLKKYYKAAYDAVRKYNPEAYVIMSNPLDGDSKALLSFVSGFNKVVLDVHYYNMFWEKFNGMNVQQNID FIRNERASDLAGVSSTNALTFIGEWTGEWTIQNASKQDFQNFAQAQLDVYSRATFGWAYWSYKC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 492 Download |
| MGNPPYKAVN LGNWLLAEGW MKPSLFEGIV NKDLLDGTQV QFKSTKFQKY LCAEDGGGTA 60 IVANRGSPSG WETFKLWRVN DSSFNFRVFN KKFVGLNNIG GGNTIVSFSD SPGNRETFQI 120 IRNNDDPLKI RIKASNGLFL QAQSETLVTA NYQGTNWEES DPSVFKMTIV RTLEGEYQLT 180 NGYGPDRAPQ VLREHWNSYI TEDDFRFMSQ NGLDAVRIPV GWWIAYDPNP PKPFVGGSLA 240 ALDNAFTWAQ NHEMKVIVDL HAVEGSQNGN EHSGTRDGYT EWGDSYIPQT VAVIDFLAQR 300 YGNKPSLGGI ELMNEPQGVN LDSLKKYYKA AYDAVRKYNP EAYVIMSNPL DGDSKALLSF 360 VSGFNKVVLD VHYYNMFWEK FNGMNVQQNI DFIRNERASD LAGVSSTNAL TFIGEWTGEW 420 TIQNASKQDF QNFAQAQLDV YSRATFGWAY WSYKCQFNRW SLKWMIENGY IKLSKKSVPR 480 DSFRQDVRDF K* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 0.001 | 84 | 152 | 69 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| cd00257 | Fascin | 7.0e-7 | 38 | 151 | 114 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 2.0e-20 | 195 | 453 | 270 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 3.0e-31 | 195 | 470 | 317 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ADD09589.1 | 0 | 3 | 473 | 31 | 504 | unknown [Trifolium repens] |
| EMBL | CAN74231.1 | 0 | 5 | 473 | 142 | 607 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI18831.1 | 0 | 5 | 478 | 34 | 510 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33033.1 | 0 | 5 | 478 | 34 | 510 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33035.1 | 0 | 5 | 454 | 34 | 486 | unnamed protein product [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 1e-33 | 176 | 469 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqc_A | 1e-33 | 176 | 469 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1cz1_A | 1e-33 | 176 | 469 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DC898905 | 376 | 102 | 473 | 0 |
| DC899299 | 317 | 161 | 473 | 0 |
| CX664525 | 327 | 19 | 343 | 0 |
| ES805208 | 300 | 19 | 318 | 0 |
| EY475443 | 244 | 6 | 249 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
