Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr3g009030.1 |
Family | GH5 |
Protein Properties | Length: 498 Molecular Weight: 56441.3 Isoelectric Point: 5.161 |
Chromosome | Chromosome/Scaffold: 3 Start: 1760165 End: 1766428 |
Description | |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 205 | 482 | 0 |
NGYGPDKAPQVLRDHWNSYITEDDFTFMSQNGLNAVRIPVGWWIAQDPNPPKPFVGGSLAALDNAFTWAQIHGMKVIVDLHAVEGSQNGNDHSGTRDGFI EWGESYIPQTVSVIDFLAKRYGNRPSLGGIELMNEPQGVNLDSLKKYYKEAYDAVRKYNPNAYVIMSNPLDADSKVLLSFVTGFNKVVLDVHYYNLYSDK FTNMNVQQNIDYINNERASDLSGVSSTNALSFVGEWTDEFLVQGASMQDYQRYGQAQLDVYSRATFGWAYWAYKCQYN |
Full Sequence |
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Protein Sequence Length: 498 Download |
MEYRNYYLSF LLALFLSCPY SSLLAQNPPY KAVNLGNWLL AEGWMKPSLF EGIVNKDLLD 60 GTQVQLMSTK FQKYLAADNG GGAGIVANRD SASGWETFPL WRVNDTYFNF RVFNKQFMGI 120 NNQGDNKIVA VSNSPSNQET FQIIRNSGDP LKIRIKASNG LYWQVRSETL VTADYGQGTS 180 WEESDPSVFR MKIVRTLEGE YQLTNGYGPD KAPQVLRDHW NSYITEDDFT FMSQNGLNAV 240 RIPVGWWIAQ DPNPPKPFVG GSLAALDNAF TWAQIHGMKV IVDLHAVEGS QNGNDHSGTR 300 DGFIEWGESY IPQTVSVIDF LAKRYGNRPS LGGIELMNEP QGVNLDSLKK YYKEAYDAVR 360 KYNPNAYVIM SNPLDADSKV LLSFVTGFNK VVLDVHYYNL YSDKFTNMNV QQNIDYINNE 420 RASDLSGVSS TNALSFVGEW TDEFLVQGAS MQDYQRYGQA QLDVYSRATF GWAYWAYKCQ 480 YNHWSLKWMI ENGYIKL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00257 | Fascin | 0.005 | 123 | 180 | 58 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
cd01339 | LDH-like_MDH | 0.002 | 353 | 394 | 50 | + L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. | ||
PRK06223 | PRK06223 | 0.001 | 342 | 394 | 61 | + malate dehydrogenase; Reviewed | ||
pfam00150 | Cellulase | 7.0e-23 | 219 | 477 | 271 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 4.0e-31 | 196 | 494 | 349 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ADD09589.1 | 0 | 3 | 497 | 7 | 504 | unknown [Trifolium repens] |
EMBL | CAN74231.1 | 0 | 23 | 497 | 134 | 607 | hypothetical protein [Vitis vinifera] |
EMBL | CBI18831.1 | 0 | 29 | 497 | 34 | 505 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33033.1 | 0 | 14 | 497 | 15 | 505 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33035.1 | 0 | 14 | 478 | 15 | 486 | unnamed protein product [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3o6a_A | 9e-35 | 200 | 493 | 50 | 381 | A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans At 2 A |
PDB | 1eqp_A | 2e-34 | 200 | 493 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1eqc_A | 2e-34 | 200 | 493 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |