CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr3g009030.1
FamilyGH5
Protein PropertiesLength: 498 Molecular Weight: 56441.3 Isoelectric Point: 5.161
ChromosomeChromosome/Scaffold: 3 Start: 1760165 End: 1766428
Description
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH52054820
  NGYGPDKAPQVLRDHWNSYITEDDFTFMSQNGLNAVRIPVGWWIAQDPNPPKPFVGGSLAALDNAFTWAQIHGMKVIVDLHAVEGSQNGNDHSGTRDGFI
  EWGESYIPQTVSVIDFLAKRYGNRPSLGGIELMNEPQGVNLDSLKKYYKEAYDAVRKYNPNAYVIMSNPLDADSKVLLSFVTGFNKVVLDVHYYNLYSDK
  FTNMNVQQNIDYINNERASDLSGVSSTNALSFVGEWTDEFLVQGASMQDYQRYGQAQLDVYSRATFGWAYWAYKCQYN
Full Sequence
Protein Sequence     Length: 498     Download
MEYRNYYLSF LLALFLSCPY SSLLAQNPPY KAVNLGNWLL AEGWMKPSLF EGIVNKDLLD    60
GTQVQLMSTK FQKYLAADNG GGAGIVANRD SASGWETFPL WRVNDTYFNF RVFNKQFMGI    120
NNQGDNKIVA VSNSPSNQET FQIIRNSGDP LKIRIKASNG LYWQVRSETL VTADYGQGTS    180
WEESDPSVFR MKIVRTLEGE YQLTNGYGPD KAPQVLRDHW NSYITEDDFT FMSQNGLNAV    240
RIPVGWWIAQ DPNPPKPFVG GSLAALDNAF TWAQIHGMKV IVDLHAVEGS QNGNDHSGTR    300
DGFIEWGESY IPQTVSVIDF LAKRYGNRPS LGGIELMNEP QGVNLDSLKK YYKEAYDAVR    360
KYNPNAYVIM SNPLDADSKV LLSFVTGFNK VVLDVHYYNL YSDKFTNMNV QQNIDYINNE    420
RASDLSGVSS TNALSFVGEW TDEFLVQGAS MQDYQRYGQA QLDVYSRATF GWAYWAYKCQ    480
YNHWSLKWMI ENGYIKL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00257Fascin0.00512318058+
cd01339LDH-like_MDH0.00235339450+
PRK06223PRK062230.00134239461+
pfam00150Cellulase7.0e-23219477271+
COG2730BglC4.0e-31196494349+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankADD09589.1034977504unknown [Trifolium repens]
EMBLCAN74231.1023497134607hypothetical protein [Vitis vinifera]
EMBLCBI18831.102949734505unnamed protein product [Vitis vinifera]
EMBLCBI33033.101449715505unnamed protein product [Vitis vinifera]
EMBLCBI33035.101447815486unnamed protein product [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3o6a_A9e-3520049350381A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans At 2 A
PDB1eqp_A2e-3420049345376A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans
PDB1eqc_A2e-3420049345376A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans
Signal Peptide
Cleavage Site
25
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DC8989053761264970
DW01561125612560
DC8992993171854970
CX664525328433670
CF8078232351974310
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_010_00111.1Aquca_010_00110.1
Brachypodium distachyonBradi2g31690.1Bradi3g38500.1
Carica papayaevm.model.supercontig_55.63evm.model.supercontig_66.87evm.model.supercontig_20.222
Citrus clementinaCiclev10025463mCiclev10026955mCiclev10025415mCiclev10000913m
Citrus sinensisorange1.1g009560morange1.1g046395morange1.1g019395morange1.1g013777morange1.1g010600m
orange1.1g009475m
Cucumis sativusCucsa.104180.2Cucsa.104180.1
Eucalyptus grandisEucgr.I00417.1Eucgr.L01170.1Eucgr.L02139.1Eucgr.I00543.1Eucgr.I00415.1
Eucgr.F00486.1Eucgr.F00489.1Eucgr.F00489.3Eucgr.F00489.2Eucgr.F00487.1
Eucgr.L01169.1Eucgr.F00488.1Eucgr.I00415.2
Fragaria vescamrna16220.1-v1.0-hybridmrna16368.1-v1.0-hybridmrna22085.1-v1.0-hybridmrna16374.1-v1.0-hybrid
Glycine maxGlyma11g37881.1Glyma18g01781.2Glyma18g01781.3Glyma18g01781.1Glyma06g47761.6
Glyma06g47761.1Glyma06g47761.5Glyma06g47761.2Glyma06g47761.8Glyma06g47761.4
Glyma06g47761.7Glyma06g47761.3Glyma13g02030.2Glyma06g47750.1Glyma13g02000.1
Glyma08g14676.1Glyma05g31460.1Glyma14g34450.1
Gossypium raimondiiGorai.009G239600.6Gorai.009G239600.5Gorai.009G239600.4Gorai.009G239600.1Gorai.009G239600.3
Gorai.009G239600.2Gorai.009G239600.7Gorai.011G110800.2Gorai.011G110800.1Gorai.003G041900.1
Gorai.003G044300.1Gorai.003G044000.4Gorai.003G044000.5Gorai.003G044200.1Gorai.003G044000.3
Gorai.003G044000.2Gorai.003G044000.1
Linum usitatissimumLus10041110Lus10036436
Malus domesticaMDP0000319015MDP0000123200MDP0000133367
Manihot esculentacassava4.1_007845mcassava4.1_026104mcassava4.1_006238m
Medicago truncatulaMedtr3g009020.1Medtr3g086750.1Medtr5g062290.1Medtr3g008960.1Medtr5g062190.1
Medtr3g009010.1Medtr8g091310.1
Mimulus guttatusmgv1a004896mmgv1a019918m
Oryza sativaLOC_Os10g22570.1.193.483LOC_Os10g22570.1.193.483LOC_Os10g22570.1.193.483LOC_Os10g22520.1LOC_Os10g22570.1.671.954
LOC_Os10g22570.1.671.954LOC_Os10g22570.1.671.954LOC_Os05g15510.2LOC_Os05g15510.1LOC_Os08g37750.1
Panicum virgatumPavirv00046245mPavirv00011301mPavirv00018291mPavirv00046244mPavirv00011300m
Pavirv00028658mPavirv00000970mPavirv00042459mPavirv00046564m
Physcomitrella patensPp1s304_43V6.1
Phaseolus vulgarisPhvul.001G254400.1Phvul.008G171300.1Phvul.002G261800.1Phvul.008G171400.1
Picea abiesMA_10427061g0010MA_479818g0010MA_4911g0010MA_14445g0010MA_23595g0010
Populus trichocarpaPotri.007G010000.1Potri.005G167800.1Potri.007G089400.1Potri.007G089400.2Potri.005G078500.1
Potri.002G093000.1
Prunus persicappa023601mppa005425mppa019648m
Ricinus communis29810.m00014529908.m00599427889.m00017327905.m00007336339.m000016
Setaria italicaSi035257mSi006205mSi021695mSi021671mSi039329m
Si013558mSi035337m
Selaginella moellendorffii12682742658240418324801
Sorghum bicolorSb10g007500.1Sb09g008170.1Sb01g024390.1Sb10g008480.1
Vitis viniferaGSVIVT01003438001GSVIVT01006372001GSVIVT01006369001GSVIVT01002801001GSVIVT01008995001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)