Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr3g010780.1 |
Family | CE8 |
Protein Properties | Length: 575 Molecular Weight: 64430.5 Isoelectric Point: 9.8707 |
Chromosome | Chromosome/Scaffold: 3 Start: 2511312 End: 2516345 |
Description | root hair specific 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 268 | 559 | 0 |
DIVVAKDGSGKYKTISDALKHVPNKSKKRTLIYVKKGIYYENVRVEKTKWNVMIIGDGMTSSIVSGKLNVVDGTPTFSTATFAVFGRNFIARDMGFRNTA GPQKHQAVALMTSADQAVYYKCHIDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIMPKLPMHGQQITITAQGKTDPNMNTGISIQYCNIS PYGNLSNVKVYLGRPWKNYSTTVYMRTRMDGFINPNGWLPWVGNSAPDTIFYAEFQNVGPGSVTKNRVKWKGLKNISSKQASKFSVKAFLQG |
Full Sequence |
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Protein Sequence Length: 575 Download |
MSFFKSYGKV DEHDQMMLEA KRKTRKRITI ISLSSIIFIG VVIAAVLGVV NSKNDDDNNN 60 NASQNSVTNS MKAVCDVTLY KDSCYNSLSS IVGSGKEVQP EELFKLSINV ALTHVSKAVE 120 YFNEHGVFKK LIENSRTNEA LKNCRVLLDL AIDHLNNTLT ASRENSSLHQ VFDDLQTWLS 180 AAGTYQQTCI EGFEDTKEQL KTSVTSYLKN STEYTSNSLA IITYINKAIN TLNLRRLMSL 240 PYENETPKWF HSKDRKLLST KDLRSKADIV VAKDGSGKYK TISDALKHVP NKSKKRTLIY 300 VKKGIYYENV RVEKTKWNVM IIGDGMTSSI VSGKLNVVDG TPTFSTATFA VFGRNFIARD 360 MGFRNTAGPQ KHQAVALMTS ADQAVYYKCH IDAYQDTLYA HSNRQFYREC NIYGTVDFIF 420 GNSAVVIQNC NIMPKLPMHG QQITITAQGK TDPNMNTGIS IQYCNISPYG NLSNVKVYLG 480 RPWKNYSTTV YMRTRMDGFI NPNGWLPWVG NSAPDTIFYA EFQNVGPGSV TKNRVKWKGL 540 KNISSKQASK FSVKAFLQGD RWIPASGAPF RSNI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 4.0e-160 | 74 | 570 | 506 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 2.0e-161 | 71 | 571 | 523 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 0 | 4 | 574 | 572 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 4 | 574 | 592 | + pectinesterase | ||
pfam01095 | Pectinesterase | 0 | 268 | 560 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29155.1 | 0 | 1 | 574 | 1 | 561 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273396.1 | 0 | 1 | 574 | 4 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311918.1 | 0 | 1 | 574 | 1 | 568 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316458.1 | 0 | 1 | 574 | 1 | 569 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515781.1 | 0 | 1 | 574 | 1 | 573 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 268 | 570 | 8 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 267 | 570 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-18 | 270 | 564 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-18 | 270 | 564 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-18 | 270 | 564 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |