CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr3g071610.1
FamilyGH85
Protein PropertiesLength: 740 Molecular Weight: 82806.2 Isoelectric Point: 5.283
ChromosomeChromosome/Scaffold: 3 Start: 22833031 End: 22839126
DescriptionGlycosyl hydrolase family 85
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH851094190
  MAGGYSDDKWIQGGDNVNAYSIWHWHLIDVFVYFSHDLVTLPPVCWINTAHRHGVKVLGTFITEWDEGKANCDVLLSTKESAQMYAERLAELAVDLGFDG
  WLINMEVELDPAQISNLKEFVDHLSSTMHSSVPGSQVLWYDSVTIDGKLNWQDQLNESNKPFFDICDGIFVNYTWKEDYPRISAAVAGDRKFDVYMGIDV
  FGRNTYGGGQWNANVALDVIRKNDVSAAIFAPGWVYETKQPPDFETAQNRIPDLLHAPVLSYGIAINCRLITSVSVSSFWWGLVEKSWGILRNFSGPLPL
  YTNFDQGRGYH
Full Sequence
Protein Sequence     Length: 740     Download
MNPRHLEPYI NRQFLIKIRN ILRFISQTTQ NLTMSTPNPN SSSSPSPSPP FDPKQPSIPI    60
SYPIKTLQEL ESRSYFDSFH YPFNKASVPI SSSSSKLPDR RRLLVCHDMA GGYSDDKWIQ    120
GGDNVNAYSI WHWHLIDVFV YFSHDLVTLP PVCWINTAHR HGVKVLGTFI TEWDEGKANC    180
DVLLSTKESA QMYAERLAEL AVDLGFDGWL INMEVELDPA QISNLKEFVD HLSSTMHSSV    240
PGSQVLWYDS VTIDGKLNWQ DQLNESNKPF FDICDGIFVN YTWKEDYPRI SAAVAGDRKF    300
DVYMGIDVFG RNTYGGGQWN ANVALDVIRK NDVSAAIFAP GWVYETKQPP DFETAQNRIP    360
DLLHAPVLSY GIAINCRLIT SVSVSSFWWG LVEKSWGILR NFSGPLPLYT NFDQGRGYHI    420
SVDGNSVSDA TWCNISCQGF QPLLELADPT NSIQVTIDLK EASFSGGGNI TFKGSLEKQT    480
YFERKILQGE FLLGEDPIHF IYSVKCNGNS SLGLKLVFTS NNDEKNYVLL TSGEVNDLSS    540
KFNKVITTRE HKGFSHGWVI NESAIAMNEY TLNEIHAVCY RSNSSLSDCT DCTVASPSDY    600
YALLGHVTIK NSDYKSDFPV SSSWLVDGKY IKWTSGSNGS KTLNIKISWT LKDGKNYLSL    660
KYNIYLVKLS KQAGGNPGTT LELVKEYLGV AQVNCFYVSD LEVPSDTSSL KFIIQVCSVD    720
GTIQALDESP YYQLEVEGP*                                                780
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam01079Hint0.00749758091+
cd00598GH18_chitinase-like2.0e-7109264175+
COG4724COG47243.0e-35120525426+
pfam03644Glyco_hydro_852.0e-117109422319+
cd06547GH85_ENGase2.0e-130104451353+
Gene Ontology
GO TermDescription
GO:0005737cytoplasm
GO:0033925mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002273683.10427388689PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002315137.105773826698predicted protein [Populus trichocarpa]
RefSeqXP_002315138.10397387695predicted protein [Populus trichocarpa]
RefSeqXP_002520781.104373811692endo beta n-acetylglucosaminidase, putative [Ricinus communis]
RefSeqXP_002520784.10347381686endo beta n-acetylglucosaminidase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3fha_D1e-298251628464A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_C1e-298251628464A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_B1e-298251628464A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_A1e-298251628464A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fhq_F2e-298251628464A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GW89545027992830
GR1077392451033470
EL4379372861284130
AJ50236722612260
JG6212243061534570
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00225.1
Arabidopsis lyrata497439.76.201497439.76.201872478497439.204.302487338
497439.204.302
Arabidopsis thalianaAT5G05460.1AT3G11040.1
Brachypodium distachyonBradi1g14127.1
Brassica rapaBra034160Bra005854
Carica papayaevm.model.supercontig_19.130
Capsella rubellaCarubv10000369mCarubv10013078m
Chlamydomonas reinhardtiiCre13.g582250.t1.2
Citrus clementinaCiclev10031026m.70.259Ciclev10031026m.70.259Ciclev10030777m
Cucumis sativusCucsa.144380.1Cucsa.144370.1
Eucalyptus grandisEucgr.J00174.1
Fragaria vescamrna21040.1-v1.0-hybrid
Glycine maxGlyma14g06120.2Glyma18g40011.1Glyma02g43025.1Glyma11g35630.1Glyma14g06130.1
Glyma14g06120.1Glyma18g02770.1Glyma02g43020.2
Gossypium raimondiiGorai.012G079500.1Gorai.011G290600.1
Linum usitatissimumLus10017430Lus10007526
Manihot esculentacassava4.1_029708mcassava4.1_031267m
Mimulus guttatusmgv1a002327mmgv1a001722m
Oryza sativaLOC_Os05g27960.1
Physcomitrella patensPp1s13_33V6.2Pp1s13_33V6.1
Phaseolus vulgarisPhvul.001G245900.1
Picea abiesMA_10436931g0010MA_10435721g0010
Populus trichocarpaPotri.008G073000.1Potri.010G184300.1Potri.010G184300.2Potri.010G184200.1Potri.010G184200.2
Prunus persicappa015834m
Ricinus communis29729.m00228229729.m002279
Setaria italicaSi021368m
Selaginella moellendorffii61572
Sorghum bicolorSb09g016230.1
Thellungiella halophilaThhalv10012879mThhalv10020200m
Vitis viniferaGSVIVT01032751001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny