| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr3g071890.1 |
| Family | AA1 |
| Protein Properties | Length: 576 Molecular Weight: 63943.1 Isoelectric Point: 9.6707 |
| Chromosome | Chromosome/Scaffold: 3 Start: 23084222 End: 23088327 |
| Description | laccase 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 31 | 561 | 0 |
| KTHEHEFVVEATPVKRLCKTHNTITVNGQYPGPTLEINNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVNGQEGTL WWHAHSSWLRATVYGALIIRPREGEPYPFPKPNHETSILLGEWWDGNPIDVVRQAQRTGAAPNISDAYTINGQPGDLYKCSTKGTTIIPIHSGETNLVRV INAALNQPLFFTIANHKLTVVGADASYVKPFTTNILMLGPGQTTDVLIHANQPPSKYYIAARAYQSAQNAPFDNTTTTAILQYHNSIKTKPIMPPLPSYN NTNIVTKFSRSFFSLRKAEVPTEIDENLFFTIGLGLNNCPKNFRKRRCQGPINGTRFTASMNNVSFTLPNNISILQAHYHGIPGVFTTDFPAKPPVKFDY TGNVSRSLWQPVPGTKAYKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDAKKDTSKFNLVDPPMRNTVAVPVNGWAVIRFVADNTRIK KVSAWILHCHLDVHIGWGLATILLVEDGVGK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 576 Download |
| MESVKTNSKY SSILIAIFVL SSFALALANP KTHEHEFVVE ATPVKRLCKT HNTITVNGQY 60 PGPTLEINNG DTLVVKVTNK ARYNVTIHWH GVRQMRTGWA DGPEFVTQCP IRPGGSYTYR 120 FTVNGQEGTL WWHAHSSWLR ATVYGALIIR PREGEPYPFP KPNHETSILL GEWWDGNPID 180 VVRQAQRTGA APNISDAYTI NGQPGDLYKC STKGTTIIPI HSGETNLVRV INAALNQPLF 240 FTIANHKLTV VGADASYVKP FTTNILMLGP GQTTDVLIHA NQPPSKYYIA ARAYQSAQNA 300 PFDNTTTTAI LQYHNSIKTK PIMPPLPSYN NTNIVTKFSR SFFSLRKAEV PTEIDENLFF 360 TIGLGLNNCP KNFRKRRCQG PINGTRFTAS MNNVSFTLPN NISILQAHYH GIPGVFTTDF 420 PAKPPVKFDY TGNVSRSLWQ PVPGTKAYKL KFGSRVQIVL QDTSIVTPEN HPIHLHGYDF 480 YIVAEGFGNF DAKKDTSKFN LVDPPMRNTV AVPVNGWAVI RFVADNTRIK KVSAWILHCH 540 LDVHIGWGLA TILLVEDGVG KLQSIQSPPQ DLPIC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 8.0e-55 | 38 | 154 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 8.0e-67 | 48 | 565 | 558 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-77 | 13 | 567 | 593 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 9.0e-91 | 48 | 565 | 554 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 31 | 575 | 551 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM54731.1 | 0 | 29 | 575 | 33 | 589 | diphenol oxidase laccase [Glycine max] |
| GenBank | ABK92474.1 | 0 | 25 | 575 | 1 | 550 | unknown [Populus trichocarpa] |
| RefSeq | XP_002312186.1 | 0 | 31 | 575 | 31 | 574 | laccase 90a [Populus trichocarpa] |
| RefSeq | XP_002315131.1 | 0 | 1 | 575 | 1 | 575 | laccase 90c [Populus trichocarpa] |
| RefSeq | XP_002520796.1 | 0 | 29 | 575 | 31 | 577 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 48 | 565 | 19 | 531 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1asq_A | 0 | 48 | 565 | 19 | 531 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1asp_B | 0 | 48 | 565 | 19 | 531 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1asp_A | 0 | 48 | 565 | 19 | 531 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1aso_B | 0 | 48 | 565 | 19 | 531 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
