| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr3g071890.2 |
| Family | AA1 |
| Protein Properties | Length: 365 Molecular Weight: 40292.1 Isoelectric Point: 9.6778 |
| Chromosome | Chromosome/Scaffold: 3 Start: 23084217 End: 23085444 |
| Description | laccase 5 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 5 | 318 | 0 |
| AGTTIIPIHSGETNLVRVINAALNQPLFFTIANHKLTVVGADASYVKPFTTNILMLGPGQTTDVLIHANQPPSKYYIAARAYQSAQNAPFDNTTTTAILQ YHNSIKTKPIMPPLPSYNNTNIVTKFSRSFFSLRKAEVPTEIDENLFFTIGLGLNNCPKNFRKRRCQGPINGTRFTASMNNVSFTLPNNISILQAHYHGI PGVFTTDFPAKPPVKFDYTGNVSRSLWQPVPGTKAYKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDAKKDTSKFNLVDPPMRNTVAV PVNGWAVIRFVADN | |||
| Full Sequence |
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| Protein Sequence Length: 365 Download |
| MIETAGTTII PIHSGETNLV RVINAALNQP LFFTIANHKL TVVGADASYV KPFTTNILML 60 GPGQTTDVLI HANQPPSKYY IAARAYQSAQ NAPFDNTTTT AILQYHNSIK TKPIMPPLPS 120 YNNTNIVTKF SRSFFSLRKA EVPTEIDENL FFTIGLGLNN CPKNFRKRRC QGPINGTRFT 180 ASMNNVSFTL PNNISILQAH YHGIPGVFTT DFPAKPPVKF DYTGNVSRSL WQPVPGTKAY 240 KLKFGSRVQI VLQDTSIVTP ENHPIHLHGY DFYIVAEGFG NFDAKKDTSK FNLVDPPMRN 300 TVAVPVNGWA VIRFVADNTR CLDSALSLGC SYWLGFGYYT IGRGWSWEIA INTITSTGPA 360 YLLG* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00394 | Cu-oxidase | 5.0e-30 | 5 | 108 | 104 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
| PLN02191 | PLN02191 | 2.0e-30 | 9 | 318 | 328 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 5.0e-36 | 7 | 318 | 325 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-42 | 9 | 318 | 321 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 4.0e-158 | 4 | 318 | 321 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM54731.1 | 0 | 7 | 341 | 219 | 566 | diphenol oxidase laccase [Glycine max] |
| GenBank | ABK92474.1 | 0 | 7 | 318 | 191 | 506 | unknown [Populus trichocarpa] |
| RefSeq | NP_181568.1 | 0 | 7 | 331 | 211 | 555 | LAC5 (laccase 5); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002312186.1 | 0 | 7 | 318 | 215 | 530 | laccase 90a [Populus trichocarpa] |
| RefSeq | XP_002520796.1 | 0 | 7 | 318 | 217 | 533 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 9e-29 | 3 | 343 | 199 | 530 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1asq_A | 9e-29 | 3 | 343 | 199 | 530 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1asp_B | 9e-29 | 3 | 343 | 199 | 530 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1asp_A | 9e-29 | 3 | 343 | 199 | 530 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1aso_B | 9e-29 | 3 | 343 | 199 | 530 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV256643 | 276 | 67 | 342 | 0 |
| DY297248 | 348 | 7 | 347 | 0 |
| EX274037 | 305 | 41 | 338 | 0 |
| DW243722 | 277 | 49 | 318 | 0 |
| FC900507 | 291 | 7 | 290 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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