Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr3g082080.1 |
Family | CBM43 |
Protein Properties | Length: 247 Molecular Weight: 26728.9 Isoelectric Point: 9.0221 |
Chromosome | Chromosome/Scaffold: 3 Start: 26304703 End: 26305557 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 157 | 235 | 2e-31 |
WCVAKPTVPDPIIQVAMDYACGSGADCKSVQPNGICFQPNTVLAHASYAFNSYWQNTKIGGGTCDFGGTAMLVTVDPSK |
Full Sequence |
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Protein Sequence Length: 247 Download |
MESRAYILRF NIAHLCLLML VSTLFPLCDA INHGRGSRSY SIKSWKKLKF SSFGYSDLDS 60 SYGTPSSQPL PPFNSLAPQP TSLPPYSPVP NPPHDVFRPP PSPKTIVTMS PPPPPSPSKH 120 VPSPPKSVIG PPQVYLPPIV YPPPPSTHKK PPQYAIWCVA KPTVPDPIIQ VAMDYACGSG 180 ADCKSVQPNG ICFQPNTVLA HASYAFNSYW QNTKIGGGTC DFGGTAMLVT VDPSKFALRT 240 IFDYLC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-23 | 157 | 227 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-37 | 157 | 234 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN78496.1 | 0 | 1 | 234 | 1 | 253 | hypothetical protein [Vitis vinifera] |
EMBL | CBI34142.1 | 0 | 10 | 234 | 2 | 244 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264622.1 | 0 | 1 | 236 | 1 | 255 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312230.1 | 3.99931e-42 | 115 | 245 | 179 | 302 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520569.1 | 5.04467e-44 | 1 | 234 | 1 | 240 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-18 | 151 | 239 | 7 | 95 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |