Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr3g082440.1 |
Family | GH9 |
Protein Properties | Length: 625 Molecular Weight: 69861.3 Isoelectric Point: 8.8597 |
Chromosome | Chromosome/Scaffold: 3 Start: 26487658 End: 26493199 |
Description | Six-hairpin glycosidases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 116 | 588 | 0 |
NYTLALHKALRFFNAQKSGRLPKSNGISWRRNSGLQDGKDTDDKKGLVGGYYDAGDNIKFHFPMSFAMTMLSWSVLEYKQKYMAVNEYNHARELIKWGTD YLLLTFNSSASKINKIYAQVGGSLNGSRTPDDHYCWQKPEDMSYPRPTTTVFEGPDLAGEMAAALAAASIVFLDDAAYSKKLVKGAETAFAFARDFGKRS TYSRGKPYIEPFYNSSGYFDEYMWGGAWLYFATGNTTYISLATNPDVPKNSKAFYMKPDLSVLSWDNKLPAAMLLLTRVRMFLNPGYPYEDMLSMYHNVT SLTMCSYLHQFNVFKWTNGGLIQLNHGQPQSLQYVVNAAFLASLFADYMEAKGVPGWYCGPNFFPISVLKSFATSQMDYIMGKNPMNMSYIVGYGEKFPR HVHHRGASIPNDHKNYSCTGGWKWRDSPDRNPNNVTGAMVGGPNPFDQFHDSRKNYNYTEPTLAGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 625 Download |
MHSRNQWGGS FELSSNSEVP SGDETSRTGD QWDKAALLDH GNRREGLDET LQSWILERPN 60 MKKKTKYVDF GCIVLSHKAL KWIFGIIFVG FCAIGLPIII AKALPKHHPS PIPPDNYTLA 120 LHKALRFFNA QKSGRLPKSN GISWRRNSGL QDGKDTDDKK GLVGGYYDAG DNIKFHFPMS 180 FAMTMLSWSV LEYKQKYMAV NEYNHARELI KWGTDYLLLT FNSSASKINK IYAQVGGSLN 240 GSRTPDDHYC WQKPEDMSYP RPTTTVFEGP DLAGEMAAAL AAASIVFLDD AAYSKKLVKG 300 AETAFAFARD FGKRSTYSRG KPYIEPFYNS SGYFDEYMWG GAWLYFATGN TTYISLATNP 360 DVPKNSKAFY MKPDLSVLSW DNKLPAAMLL LTRVRMFLNP GYPYEDMLSM YHNVTSLTMC 420 SYLHQFNVFK WTNGGLIQLN HGQPQSLQYV VNAAFLASLF ADYMEAKGVP GWYCGPNFFP 480 ISVLKSFATS QMDYIMGKNP MNMSYIVGYG EKFPRHVHHR GASIPNDHKN YSCTGGWKWR 540 DSPDRNPNNV TGAMVGGPNP FDQFHDSRKN YNYTEPTLAG NAGLVAALIS LTSTTGSGID 600 VNTIFEAIPP FGPENPPPPP PWKP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 2.0e-108 | 115 | 603 | 503 | + endoglucanase | ||
PLN02340 | PLN02340 | 1.0e-109 | 116 | 597 | 501 | + endoglucanase | ||
PLN02266 | PLN02266 | 3.0e-110 | 107 | 596 | 506 | + endoglucanase | ||
PLN02345 | PLN02345 | 7.0e-143 | 120 | 594 | 486 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 8.0e-157 | 116 | 588 | 479 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACT54547.1 | 0 | 1 | 608 | 1 | 612 | endo-1,4-beta-glucanase [Dimocarpus longan] |
RefSeq | XP_002266444.1 | 0 | 1 | 608 | 1 | 603 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312211.1 | 0 | 1 | 624 | 1 | 620 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315101.1 | 0 | 1 | 608 | 1 | 605 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514768.1 | 0 | 1 | 608 | 1 | 608 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 116 | 593 | 4 | 430 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1ksc_A | 0 | 116 | 593 | 4 | 430 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1ks8_A | 0 | 116 | 593 | 4 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 113 | 614 | 2 | 462 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 113 | 614 | 2 | 462 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |