| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr3g083410.1 |
| Family | AA1 |
| Protein Properties | Length: 555 Molecular Weight: 62299.1 Isoelectric Point: 9.2961 |
| Chromosome | Chromosome/Scaffold: 3 Start: 26916862 End: 26919388 |
| Description | SKU5 similar 12 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 45 | 505 | 0 |
| TMNNLSILINGQFPGPEINSTSNNNVVANVFNNLDEPLLFTWHGVQQRKNSWQDGTPGVQCPILPGTNYTYKFQVKDQIGSYFYYPTTGLQRAVGGFGGL RIFSRLLIPVPYADPEDEYWVLICDWYGKSHKTLKMELDSGRSIGRPAGVIINGKNAKGDGSDEPLYTMKPGKTYKYRICNTGLKDTLNFRFQGHGMKLV ETEGSHVVQNVYDSLDVHVGQCYTVLVTADKEPRDYYMIASTRMTKYNLLGKGIIRYTNGKGPASPVLPPAPVGWAWSLNQFRSFRWNLTASAARPNPQG SYHYGQINITRTIKFVNSVSNVNGKLCYAINGVSHVDPETPVKLAEYYGIADKVFKYNIISDEPPTDLKAITIAPNVMQTTFRTFIEIIFENPEKVLQSY NLGGYSFFAVAGEPGTWTPEKRKGYNLLDAISRHTIQVFPKSWAAIMLTFDNAGMWQLRSE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 555 Download |
| MVRIKSLHLG RSLEAFGVKK ITPTIQAKIP IFINPNPKTG SNHCTMNNLS ILINGQFPGP 60 EINSTSNNNV VANVFNNLDE PLLFTWHGVQ QRKNSWQDGT PGVQCPILPG TNYTYKFQVK 120 DQIGSYFYYP TTGLQRAVGG FGGLRIFSRL LIPVPYADPE DEYWVLICDW YGKSHKTLKM 180 ELDSGRSIGR PAGVIINGKN AKGDGSDEPL YTMKPGKTYK YRICNTGLKD TLNFRFQGHG 240 MKLVETEGSH VVQNVYDSLD VHVGQCYTVL VTADKEPRDY YMIASTRMTK YNLLGKGIIR 300 YTNGKGPASP VLPPAPVGWA WSLNQFRSFR WNLTASAARP NPQGSYHYGQ INITRTIKFV 360 NSVSNVNGKL CYAINGVSHV DPETPVKLAE YYGIADKVFK YNIISDEPPT DLKAITIAPN 420 VMQTTFRTFI EIIFENPEKV LQSYNLGGYS FFAVAGEPGT WTPEKRKGYN LLDAISRHTI 480 QVFPKSWAAI MLTFDNAGMW QLRSEHAEHR YLGQQLYLSV ESEEKSTRDE YNLPETQLVC 540 GIVKDMPRPP PKYV* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02792 | PLN02792 | 4.0e-177 | 25 | 551 | 532 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 51 | 551 | 501 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 51 | 541 | 492 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 43 | 541 | 507 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 47 | 544 | 510 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002297609.1 | 0 | 51 | 551 | 48 | 550 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002299087.1 | 0 | 51 | 551 | 48 | 548 | hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa] |
| RefSeq | XP_002303974.1 | 0 | 51 | 551 | 48 | 550 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523381.1 | 0 | 51 | 554 | 48 | 551 | multicopper oxidase, putative [Ricinus communis] |
| RefSeq | XP_002523382.1 | 0 | 51 | 551 | 48 | 548 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 48 | 541 | 22 | 539 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asq_A | 0 | 48 | 541 | 22 | 539 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asp_B | 0 | 48 | 541 | 22 | 539 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asp_A | 0 | 48 | 541 | 22 | 539 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1aso_B | 0 | 48 | 541 | 22 | 539 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EG020403 | 340 | 110 | 449 | 0 |
| HO801725 | 440 | 105 | 541 | 0 |
| JG074571 | 313 | 237 | 548 | 0 |
| JG076426 | 314 | 239 | 551 | 0 |
| DT761438 | 308 | 177 | 478 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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