| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr3g086580.1 |
| Family | GH27 |
| Protein Properties | Length: 663 Molecular Weight: 74677.5 Isoelectric Point: 7.1497 |
| Chromosome | Chromosome/Scaffold: 3 Start: 28518869 End: 28524060 |
| Description | Melibiase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH27 | 24 | 153 | 3.3e-23 |
| SKNVSDTQSHLQLASTPPRGWNSYDCFCWIISEQEFLQSAQIVSQRLRDHGYEYVVVDYLWYRRKVQGAYHDSLGFDVIDEWGRMIPDPERWPSSQDGKG FSEVANRVHNMGLKFGIHVMRGISTQAVNA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 663 Download |
| MKCLCLSIFL FILLSLFSFH GVSSKNVSDT QSHLQLASTP PRGWNSYDCF CWIISEQEFL 60 QSAQIVSQRL RDHGYEYVVV DYLWYRRKVQ GAYHDSLGFD VIDEWGRMIP DPERWPSSQD 120 GKGFSEVANR VHNMGLKFGI HVMRGISTQA VNANTPILDT TTGSAYKESG RLWYAKDIGI 180 PERACGWMTH GFMSVNTTLG AGKAFLRSLY VQYAEWGVDF VKHDCVFGDD LDLNEISYVS 240 EVLREFDRPI VYSLSPGTSV TPAMAKDVSG LVNLYRITAD DWDTWGDVKS HFDVSRDFST 300 ANMIGAKSLM GNSWPDLDML PFGWLTDGAS CWKTPPVFLS HRLSKLKHTS RGTNAGPHRY 360 SNLNLSEKRT QMTLWAMAKS PLMYGGDVRK IDPTTYDLIT NPTLLEINFF SSNNMEFPSI 420 TSLKSEDQDY GRQMRRSYTE TKTSYTHSIG LTSCTDSKTS GWISESLDQY PERICWKWNL 480 GNNHLLPPFC MHKRELNLAS DEENMHQDYH HLVAVNKIKF CLDASARRKL TSKEFRRGTF 540 SPCRLDSNQM WQLNLNGTLV NSYSGLCATV KPVKAPISSA GFRSWVATGR TGEVYVAFFN 600 LSDQKTVISA QTSELSKVFH GRDLSSCKGS EVWSGSDIIV TQGTLSAEVE MHGTALFVLN 660 CN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02229 | PLN02229 | 1.0e-19 | 36 | 408 | 378 | + alpha-galactosidase | ||
| PLN02808 | PLN02808 | 6.0e-20 | 36 | 408 | 376 | + alpha-galactosidase | ||
| PLN03231 | PLN03231 | 2.0e-157 | 40 | 416 | 382 | + putative alpha-galactosidase; Provisional | ||
| PLN02899 | PLN02899 | 0 | 32 | 661 | 637 | + alpha-galactosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD32283.2 | 0 | 1 | 662 | 3 | 645 | Glycoside hydrolase, clan GH-D; Ricin B-related lectin [Medicago truncatula] |
| EMBL | CBI16803.1 | 0 | 10 | 661 | 9 | 643 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002282325.1 | 0 | 10 | 661 | 9 | 643 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314588.1 | 0 | 32 | 661 | 23 | 648 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530047.1 | 0 | 9 | 661 | 11 | 639 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cc1_B | 0 | 37 | 408 | 9 | 341 | A Chain A, Crystal Structure Of A Putative Alpha-N-Acetylgalactosaminidase (Bh1870) From Bacillus Halodurans C-125 At 2.00 A Resolution |
| PDB | 3cc1_A | 0 | 37 | 408 | 9 | 341 | A Chain A, Crystal Structure Of A Putative Alpha-N-Acetylgalactosaminidase (Bh1870) From Bacillus Halodurans C-125 At 2.00 A Resolution |
| PDB | 1uas_A | 2e-17 | 36 | 452 | 5 | 323 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
