| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr3g088520.1 |
| Family | GH35 |
| Protein Properties | Length: 695 Molecular Weight: 77575.1 Isoelectric Point: 9.0479 |
| Chromosome | Chromosome/Scaffold: 3 Start: 29380346 End: 29387185 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 33 | 337 | 0 |
| LVINGHHKILFSGSIHYPRSTPQMWPDLISKAKEGGLDVIQTYVFWNLHEPQQGQYEFNGRFDLVGFIKEIQAQGLYVTLRIGPYIESECTYGGLPLWLH DVPGIVFRTDNDQFKFHMQRFTTKIVNMMKSANLFASQGGPIILSQIENEYGSIQSKFRANGLPYIHWAAQMAVGLQTGVPWMMCKQDDAPDPVINACNG MQCGRNFKGPNSPNKPSLWTENWTSFLQAFGGAPYMRSASDIAYNVALFIAKKGSYVNYYMYHGGTNFDRLASAFIITAYYDEAPLDEYGLVRQPKWGHL KELHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 695 Download |
| MGEWWRFLLH ALILTVSLCT VHGANVTYDR TSLVINGHHK ILFSGSIHYP RSTPQMWPDL 60 ISKAKEGGLD VIQTYVFWNL HEPQQGQYEF NGRFDLVGFI KEIQAQGLYV TLRIGPYIES 120 ECTYGGLPLW LHDVPGIVFR TDNDQFKFHM QRFTTKIVNM MKSANLFASQ GGPIILSQIE 180 NEYGSIQSKF RANGLPYIHW AAQMAVGLQT GVPWMMCKQD DAPDPVINAC NGMQCGRNFK 240 GPNSPNKPSL WTENWTSFLQ AFGGAPYMRS ASDIAYNVAL FIAKKGSYVN YYMYHGGTNF 300 DRLASAFIIT AYYDEAPLDE YGLVRQPKWG HLKELHASIK SCSQPLLDGT QTTFSLGSEQ 360 QAYVFRSSTE CAAFLENSGP RDVTIQFQNI SYELPGKSIS ILPGCKNVVF NTGKVSIQNN 420 VRAMKPRLQF NSAENWKVYT EAIPNFAHTS KRADTLLDQI STAKDTSDYM WYTFRFNNKS 480 PNAKSVLSIY SQGDVLHSFI NGVLTGSAHG SRNNTQVTMK KNVNLINGMN NISILSATVG 540 LPNSGAFLES RVAGLRKVEV QGRDFSSYSW GYQVGLLGEK LQIFTVSGSS KVQWKSFQSS 600 TKPLTWYQTT FHAPAGNDPV VVNLGSMGKG LAWVNGQGIG RYWVSFHKPD GTPSQQWYHI 660 PRSFLKSTGN LLVILEEETG NPLGITLDTV YIKN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 9.0e-7 | 48 | 191 | 167 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 1.0e-15 | 26 | 185 | 165 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-147 | 32 | 339 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 7 | 687 | 718 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC43014.1 | 0 | 5 | 692 | 4 | 697 | unknown protein [Arabidopsis thaliana] |
| EMBL | CBI18990.1 | 0 | 1 | 692 | 5 | 703 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_177866.2 | 0 | 5 | 692 | 4 | 697 | BGAL16 (beta-galactosidase 16); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
| RefSeq | XP_002302225.1 | 0 | 23 | 692 | 5 | 680 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306647.1 | 0 | 25 | 692 | 1 | 669 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-37 | 30 | 335 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0001 | 440 | 676 | 345 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 4e-31 | 25 | 322 | 10 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 4e-31 | 25 | 322 | 10 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 4e-31 | 25 | 322 | 10 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
