Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr3g105230.1 |
Family | GH9 |
Protein Properties | Length: 489 Molecular Weight: 54492.8 Isoelectric Point: 8.0527 |
Chromosome | Chromosome/Scaffold: 3 Start: 37057583 End: 37060008 |
Description | glycosyl hydrolase 9A4 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH9 | 30 | 482 | 0 |
NYKEALTKSLIFLEAQRSGKLPPNNRVPWRGDSAVDDGKLANVDLSGGYYDAGDNVKYGLPMAFTVTTLSWAAIFYKTEFEATKEMGNIQDAIKWGTDYF LKASSRRNKLYVEVGDPEEDHHCWAPPEKMKTKRSVKVIDSNTPGSEIASETAAAMASSSIVFRHTDRKYARRLLNKAKLLFDLAKSHKGTYDGECPFYC SYSGYNDELVWAATWLYMATKKSLYMKYIQEESISANVAEFSWDLKYAGVQVLLTQLHFEGQKGLETFKSHGESYICSVLPDSPYHQIHLSPGGFIHMRD GANTQYATSTSFLFTVYSDLLAKYKQKVKCGNKEFDSSHVLDFAKKQVSIPIMDYILGKNPEGRSYMVGFGKNPPTQAHHRGASVPKLSPNEDINCPMSF SKWLKRDGPNPHELTGAIVGGPDINDKFDDNRTDSPKTEPCTYVNSLAAGALA |
Full Sequence |
---|
Protein Sequence Length: 489 Download |
MDSKSVYWAI IVAWLTLFQG SMILVQGQFN YKEALTKSLI FLEAQRSGKL PPNNRVPWRG 60 DSAVDDGKLA NVDLSGGYYD AGDNVKYGLP MAFTVTTLSW AAIFYKTEFE ATKEMGNIQD 120 AIKWGTDYFL KASSRRNKLY VEVGDPEEDH HCWAPPEKMK TKRSVKVIDS NTPGSEIASE 180 TAAAMASSSI VFRHTDRKYA RRLLNKAKLL FDLAKSHKGT YDGECPFYCS YSGYNDELVW 240 AATWLYMATK KSLYMKYIQE ESISANVAEF SWDLKYAGVQ VLLTQLHFEG QKGLETFKSH 300 GESYICSVLP DSPYHQIHLS PGGFIHMRDG ANTQYATSTS FLFTVYSDLL AKYKQKVKCG 360 NKEFDSSHVL DFAKKQVSIP IMDYILGKNP EGRSYMVGFG KNPPTQAHHR GASVPKLSPN 420 EDINCPMSFS KWLKRDGPNP HELTGAIVGG PDINDKFDDN RTDSPKTEPC TYVNSLAAGA 480 LAKLASLG* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02266 | PLN02266 | 1.0e-151 | 30 | 474 | 458 | + endoglucanase | ||
PLN02171 | PLN02171 | 7.0e-153 | 9 | 474 | 481 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 1.0e-157 | 30 | 474 | 459 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 1.0e-174 | 9 | 474 | 470 | + endoglucanase | ||
PLN02909 | PLN02909 | 0 | 9 | 474 | 471 | + Endoglucanase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN82881.1 | 0 | 29 | 485 | 13 | 464 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 9 | 478 | 10 | 475 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 10 | 486 | 495 | 968 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189972.2 | 0 | 21 | 486 | 24 | 485 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002308519.1 | 0 | 31 | 488 | 16 | 468 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 29 | 488 | 3 | 432 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1ksc_A | 0 | 29 | 488 | 3 | 432 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1ks8_A | 0 | 29 | 488 | 3 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 29 | 484 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 29 | 484 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |