y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr3g117840.1 |
Family | GH35 |
Protein Properties | Length: 848 Molecular Weight: 94512.6 Isoelectric Point: 8.7134 |
Chromosome | Chromosome/Scaffold: 3 Start: 42926326 End: 42929807 |
Description | glycosyl hydrolase family 35 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 42 | 346 | 0 |
LFVNGRRELLFSGSIHYTRSTPDAWPDILDKARHGGLNVIQTYVFWNAHEPEQGKFNFEGNNDLVKFIRLVQSKGMYVTLRVGPFIQAEWNHGGLPYWLR EVPGIIFRSDNEPYKKYMKAYVSKIIQMMKDEKLFAPQGGPIILAQIENEYNHIQLAYEEKGDSYVQWAANMAVALDIGVPWIMCKQKDAPDPVINACNG RHCGDTFSGPNKPYKPSLWTENWTAQYRVFGDPVSQRSAEDIAFSVARFFSKNGNLVNYYMYHGGTNFGRTTSAFTTTRYYDEAPLDEYGMERQPKWSHL RDAHK |
Full Sequence |
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Protein Sequence Length: 848 Download |
MTPTHNLAFL SILLVLLPAI VAAHDHGRVA GINNVTYDGK SLFVNGRREL LFSGSIHYTR 60 STPDAWPDIL DKARHGGLNV IQTYVFWNAH EPEQGKFNFE GNNDLVKFIR LVQSKGMYVT 120 LRVGPFIQAE WNHGGLPYWL REVPGIIFRS DNEPYKKYMK AYVSKIIQMM KDEKLFAPQG 180 GPIILAQIEN EYNHIQLAYE EKGDSYVQWA ANMAVALDIG VPWIMCKQKD APDPVINACN 240 GRHCGDTFSG PNKPYKPSLW TENWTAQYRV FGDPVSQRSA EDIAFSVARF FSKNGNLVNY 300 YMYHGGTNFG RTTSAFTTTR YYDEAPLDEY GMERQPKWSH LRDAHKALLL CRKAILGGVP 360 TVQKLNDYHE VRIFEKPGTS TCSAFITNNH TNQAATISFR GSNYFLPAHS ISVLPDCKTV 420 VYNTQNVMNQ LVYYKLISSH LIIKLIVSQH NKRNFVKSAV ANNLKWELFL EAIPSSKKLE 480 SNQKIPLELY TLLKDTTDYG WYTTSFELGP EDLPKKSAIL RIMSLGHTLS AFVNGQYIGT 540 DHGTHEEKSF EFEQPANFKV GTNYISILAT TVGLPDSGAY MEHRYAGPKS ISILGLNKGK 600 LELTKNGWGH RVGLRGEQLK VFTEEGSKKV QWDPVTGETR ALSWLKTRFA TPEGRGPVAI 660 RMTGMGKGMI WVNGKSIGRH WMSFLSPLGQ PSQEEYHIPR DYLNAKDNLL VVLEEEKGSP 720 EKIEIMIVDR DTICSYITEN SPANVNSWGS KNGEFRSVGK NSGPQASLKC PSGKKIVAVE 780 FASFGNPSGY CGDFALGNCN GGAAKGVVEK ACLGKEECLV EVNRANFNGQ GCAGSVNTLA 840 IQAKCSY* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 6.0e-7 | 64 | 192 | 143 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 4.0e-15 | 768 | 845 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 5.0e-22 | 35 | 192 | 165 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 7.0e-150 | 41 | 348 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 31 | 846 | 844 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACC60982.1 | 0 | 32 | 845 | 25 | 826 | beta-galactosidase 2 precursor [Petunia x hybrida] |
EMBL | CAB64750.1 | 0 | 9 | 845 | 16 | 837 | putative beta-galactosidase [Arabidopsis thaliana] |
RefSeq | XP_002278545.1 | 0 | 8 | 845 | 7 | 829 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306183.1 | 0 | 35 | 846 | 31 | 827 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002312963.1 | 0 | 35 | 846 | 31 | 826 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 9e-38 | 39 | 343 | 11 | 324 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-35 | 35 | 331 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 0.0009 | 607 | 743 | 503 | 631 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-35 | 35 | 331 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |