CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr3g118520.2
FamilyGT13
Protein PropertiesLength: 303 Molecular Weight: 35570.7 Isoelectric Point: 7.538
ChromosomeChromosome/Scaffold: 3 Start: 43212699 End: 43220461
Descriptionalpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT13222840
  IQMRLFASQSQYADRLAAAIEAENHCTAQIRSLIDQISLQQGRILDLQQERNRREQECSQIKSLVQDLERKDVRRLIDKVQVPVAAVVIMACNRADYLER
  TINSVLKYQRPISSRFPLFVSQDGSNSDVKRKALSYDELSHMQHLDFEPVQTERPGELIAYYKIARHYKWALGQLFDKHNFNRVIILEDDMEIAPDFFDY
  FEAMATLLDKDKSIMAVSSWNDNGQKQFVHDPYELYRSDFFPGLGWMLARSTWDELSPKWPKI
Full Sequence
Protein Sequence     Length: 303     Download
MAKFWCDFRF LLFVAALVFI YIQMRLFASQ SQYADRLAAA IEAENHCTAQ IRSLIDQISL    60
QQGRILDLQQ ERNRREQECS QIKSLVQDLE RKDVRRLIDK VQVPVAAVVI MACNRADYLE    120
RTINSVLKYQ RPISSRFPLF VSQDGSNSDV KRKALSYDEL SHMQHLDFEP VQTERPGELI    180
AYYKIARHYK WALGQLFDKH NFNRVIILED DMEIAPDFFD YFEAMATLLD KDKSIMAVSS    240
WNDNGQKQFV HDPYELYRSD FFPGLGWMLA RSTWDELSPK WPKIKRESQR TTIYPTRSMQ    300
NI* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam13641Glyco_tranf_2_30.003107233129+
pfam00535Glycos_transf_20.001108271166+
cd00761Glyco_tranf_GTA_type3.0e-6108241134+
cd02514GT13_GLCNAC-TI4.0e-95105283181+
pfam03071GNT-I4.0e-13120283270+
Gene Ontology
GO TermDescription
GO:0000139Golgi membrane
GO:0003827alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0006487protein N-linked glycosylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACU18645.1012831283unknown [Glycine max]
EMBLCAC80700.1012831283N-acetylglucosaminyltransferase I [Arabidopsis thaliana]
EMBLCBI29533.1012831283unnamed protein product [Vitis vinifera]
RefSeqNP_195537.2012831283CGL1 (COMPLEX GLYCAN LESS 1); alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase/ protein N-acetylglucosaminyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana]
RefSeqXP_002328133.1012831284predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1foa_A4.99997e-411022905201A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB1fo9_A4.99997e-411022905201A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB1fo8_A8.00001e-411052903196A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
PDB2apc_A8.99998e-411052902195A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
PDB2am5_A8.99998e-411052902195A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
Transmembrane Domains
StartEnd
527
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
BM77974528042830
BM78005628042830
EY47507723112310
EY475077132312435.8
EY475077132442565.8
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00911.3Aquca_007_00911.4Aquca_007_00911.2Aquca_007_00911.1Aquca_007_00911.5
Arabidopsis lyrata912565490588
Arabidopsis thalianaAT4G38240.1AT4G38240.2AT4G38240.3
Brachypodium distachyonBradi3g60820.3Bradi3g60820.1Bradi3g60820.2
Brassica rapaBra033557
Carica papayaevm.TU.contig_28580.1.22.235evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.22.235
Capsella rubellaCarubv10007540m
Citrus clementinaCiclev10028418m
Citrus sinensisorange1.1g019888morange1.1g012912morange1.1g012941m
Cucumis sativusCucsa.099720.1Cucsa.099720.2
Eucalyptus grandisEucgr.L00584.1Eucgr.L00583.1Eucgr.H04987.1Eucgr.H04987.2Eucgr.H04989.3
Eucgr.H04989.2Eucgr.H04989.4Eucgr.H04989.1
Fragaria vescamrna17328.1-v1.0-hybrid
Glycine maxGlyma04g00200.1Glyma06g00230.1
Gossypium raimondiiGorai.008G014000.2Gorai.008G014000.3Gorai.008G014000.1
Linum usitatissimumLus10022994Lus10001389
Malus domesticaMDP0000173465.283.435MDP0000170967.230.351MDP0000170967.22.209MDP0000170967.22.209MDP0000173465.283.435
MDP0000173465.22.268MDP0000173465.22.268MDP0000170967.230.351
Manihot esculentacassava4.1_024783m
Medicago truncatulaMedtr3g118520.1Medtr3g118520.3
Mimulus guttatusmgv1a006517mmgv1a006750m
Oryza sativaLOC_Os02g58590.1.304.426LOC_Os02g58590.1.304.426LOC_Os02g58590.1.22.283LOC_Os02g58590.1.22.283
Panicum virgatumPavirv00053907mPavirv00020030m
Physcomitrella patensPp1s100_54V6.1Pp1s246_61V6.1
Phaseolus vulgarisPhvul.009G115600.1
Picea abiesMA_901813g0010
Populus trichocarpaPotri.009G168000.2Potri.009G168000.1Potri.009G168000.4Potri.004G206900.3Potri.004G206900.1
Potri.004G206900.2Potri.009G168000.3
Prunus persicappa006221m
Ricinus communis29675.m000398.22.23129675.m000398.232.34829675.m000398.232.34829675.m000398.22.231
Setaria italicaSi006441mSi006440m
Selaginella moellendorffii268301
Sorghum bicolorSb08g003660.1
Thellungiella halophilaThhalv10025211mThhalv10025208mThhalv10025250m
Vitis viniferaGSVIVT01002028001GSVIVT01002907001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny