Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g010200.1 |
Family | GH17 |
Protein Properties | Length: 392 Molecular Weight: 42984.6 Isoelectric Point: 8.7267 |
Chromosome | Chromosome/Scaffold: 4 Start: 2009649 End: 2011749 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 34 | 352 | 0 |
GVNYGRVADNLPPPESVVTLLKAAKIKNVRIYDVNPQVLSAFKGSGIGLSVCLPNELLTDIGVGEDRAMNWIKDNVQPYLPGTKIVGIAIGNEILGGGNI EVWEALLPAAKNIYSALDRLGLAKQIEVSTPHSEAVFANSYPPSSCTFRDDIVPYMKPLLEFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGI YDPKSKLHYDNMFDAQVDAAYFALEKFGFDKMEVIVSETGWASHGDDNEAGATVKNAKTYNKNMRKRLLKRKGTPHRPKMLVRVYIFALFNENLKPGPGS ERHFGLFNHDGSIAYDIGF |
Full Sequence |
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Protein Sequence Length: 392 Download |
MVLSSSCSFF LWLLILSATF SLVLGNKAFT GTYGVNYGRV ADNLPPPESV VTLLKAAKIK 60 NVRIYDVNPQ VLSAFKGSGI GLSVCLPNEL LTDIGVGEDR AMNWIKDNVQ PYLPGTKIVG 120 IAIGNEILGG GNIEVWEALL PAAKNIYSAL DRLGLAKQIE VSTPHSEAVF ANSYPPSSCT 180 FRDDIVPYMK PLLEFFSQIG TPFYINAYPF LAYKNDPQHI DINYALFKKN PGIYDPKSKL 240 HYDNMFDAQV DAAYFALEKF GFDKMEVIVS ETGWASHGDD NEAGATVKNA KTYNKNMRKR 300 LLKRKGTPHR PKMLVRVYIF ALFNENLKPG PGSERHFGLF NHDGSIAYDI GFTGLKPSSA 360 TSSFLSFKGI GSSYVMVSSS CIGILLLLIA L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0006 | 264 | 343 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-89 | 34 | 352 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70046.1 | 0 | 24 | 377 | 20 | 370 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36326.1 | 0 | 24 | 389 | 31 | 397 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265779.1 | 0 | 24 | 355 | 21 | 352 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299750.1 | 0 | 13 | 368 | 1 | 352 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 28 | 368 | 3 | 342 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 34 | 353 | 3 | 316 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3f55_C | 0 | 34 | 353 | 3 | 316 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3f55_B | 0 | 34 | 353 | 3 | 316 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3f55_A | 0 | 34 | 353 | 3 | 316 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3em5_D | 0 | 34 | 353 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |