y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g015460.1 |
Family | GH1 |
Protein Properties | Length: 507 Molecular Weight: 57680.9 Isoelectric Point: 6.3284 |
Chromosome | Chromosome/Scaffold: 4 Start: 3723912 End: 3731184 |
Description | beta glucosidase 13 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 44 | 503 | 0 |
RSSFPEGFVFGTGSSNYQYEGAVSEDGRGKGTWDIFAHTPGMVKDGKNADVAIDHYHRYKEDVQIMKNMNTDAYRFSISWPRIVPTGKISDGVNQAGIIF YKNLIYELLANGQIPYVTLFHWDLPQALQDDYGGFVSENIRKDFKDFVDICFKEFGDSVKHWVTFNEPFSYTLSTSDWYKSTHNQLLAHADVFELYKTTY QAQNGVIGIGLNSHWFKPYSTDPLDQKAAEDALDFMFGWFIQPLTTGEYPASLVSYVGDKLPKFTAEQSKSLIGSYDFIGINYYTSMYAANATKPIPIQS PSGGADGVNSVFKIVNVTLTDKNKDGTYIGAWAATWLYVCPKGIQDLLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSA MRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINFVDYENGHLTRHPKLSARWFRKFLQHNR |
Full Sequence |
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Protein Sequence Length: 507 Download |
MRNVIRPPPP KRKRPHSEIS SSTVQSGAEP VIVSTYADSF ELNRSSFPEG FVFGTGSSNY 60 QYEGAVSEDG RGKGTWDIFA HTPGMVKDGK NADVAIDHYH RYKEDVQIMK NMNTDAYRFS 120 ISWPRIVPTG KISDGVNQAG IIFYKNLIYE LLANGQIPYV TLFHWDLPQA LQDDYGGFVS 180 ENIRKDFKDF VDICFKEFGD SVKHWVTFNE PFSYTLSTSD WYKSTHNQLL AHADVFELYK 240 TTYQAQNGVI GIGLNSHWFK PYSTDPLDQK AAEDALDFMF GWFIQPLTTG EYPASLVSYV 300 GDKLPKFTAE QSKSLIGSYD FIGINYYTSM YAANATKPIP IQSPSGGADG VNSVFKIVNV 360 TLTDKNKDGT YIGAWAATWL YVCPKGIQDL LLYTKEKYNN PTIIITENGM NEVNDPTLSL 420 EEALMDTNRI DYFYRHLYYL LSAMRQGVKV QGYFAWSLLD NFEWNDGYTV RFGINFVDYE 480 NGHLTRHPKL SARWFRKFLQ HNRIIG* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 2.0e-114 | 39 | 502 | 489 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 6.0e-121 | 31 | 499 | 494 | + beta-glucosidase | ||
COG2723 | BglB | 7.0e-126 | 44 | 505 | 481 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 6.0e-148 | 48 | 495 | 465 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-165 | 46 | 502 | 473 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABW76286.1 | 0 | 1 | 506 | 1 | 506 | beta-glucosidase G1 [Medicago truncatula] |
GenBank | ACD65509.2 | 0 | 33 | 501 | 30 | 513 | beta-glucosidase D4 [Lotus japonicus] |
GenBank | ACD65510.1 | 0 | 33 | 500 | 30 | 512 | beta-glucosidase D2 [Lotus japonicus] |
GenBank | ACD65511.1 | 0 | 33 | 500 | 30 | 514 | beta-glucosidase D7 [Lotus japonicus] |
RefSeq | XP_002285582.1 | 0 | 42 | 500 | 33 | 508 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1cbg_A | 0 | 29 | 500 | 2 | 489 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_B | 0 | 26 | 499 | 14 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_A | 0 | 26 | 499 | 14 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_B | 0 | 26 | 499 | 14 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_A | 0 | 26 | 499 | 14 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BF004003 | 273 | 185 | 457 | 0 |
BQ164895 | 265 | 56 | 320 | 0 |
BG644576 | 251 | 243 | 493 | 0 |
BG645988 | 248 | 56 | 303 | 0 |
BQ255263 | 253 | 57 | 309 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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