Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g022240.1 |
Family | GT14 |
Protein Properties | Length: 420 Molecular Weight: 48516.6 Isoelectric Point: 9.2455 |
Chromosome | Chromosome/Scaffold: 4 Start: 6246825 End: 6252315 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 73 | 324 | 0 |
FAYLLTGTKGEVSQLKRVLQAIYHPRNYYLLHLDLEASSEERVELAKYVKSEKVFGVFGNVMVVGKGDLVTYKGPTMIASTLHSVALFLKRVGDWDWFVN LSASDYPLFSQDDLLHIFSFMPRDINFIEHTSNMGWKEFQRARPIIIDPGLYHSRVSSVYYAKERRSLPSSFKLFTGSEWAVLTKPFLEFCVYGWDNLPR TLLMYYTNFLSSNEGYFQTVLCNHKDYQNTTVNNDLRYLRWDNPPKQQPLSL |
Full Sequence |
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Protein Sequence Length: 420 Download |
MKRNHSSHHH QNHHNNHHNP PRKWLIIPTL TISLLLFFFF IILLPYSKPS SSSLSSDNPS 60 FTAHLNLPKL PKFAYLLTGT KGEVSQLKRV LQAIYHPRNY YLLHLDLEAS SEERVELAKY 120 VKSEKVFGVF GNVMVVGKGD LVTYKGPTMI ASTLHSVALF LKRVGDWDWF VNLSASDYPL 180 FSQDDLLHIF SFMPRDINFI EHTSNMGWKE FQRARPIIID PGLYHSRVSS VYYAKERRSL 240 PSSFKLFTGS EWAVLTKPFL EFCVYGWDNL PRTLLMYYTN FLSSNEGYFQ TVLCNHKDYQ 300 NTTVNNDLRY LRWDNPPKQQ PLSLKLEHFE DMAHSGAPFA RRFDKDDPIL DKIDRELLGR 360 SDGRFTPGGW CLGNHLKGKD PCDVYGNPDV VNPSVRSKIL EKLMLILLDS ENFRPKQCK* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 3.0e-65 | 73 | 319 | 250 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-161 | 68 | 419 | 352 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK26987.1 | 0 | 63 | 418 | 68 | 423 | unknown [Picea sitchensis] |
GenBank | ACU24011.1 | 0 | 70 | 419 | 49 | 398 | unknown [Glycine max] |
RefSeq | XP_002269924.1 | 0 | 52 | 419 | 98 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309670.1 | 0 | 66 | 419 | 62 | 417 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527729.1 | 0 | 68 | 418 | 38 | 388 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000006 | 83 | 339 | 95 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000006 | 83 | 339 | 95 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000006 | 83 | 339 | 95 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000006 | 83 | 339 | 95 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000000002 | 83 | 339 | 95 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |