| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr4g022610.1 |
| Family | GT1 |
| Protein Properties | Length: 907 Molecular Weight: 101116 Isoelectric Point: 6.8131 |
| Chromosome | Chromosome/Scaffold: 4 Start: 6446874 End: 6460496 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT1 | 688 | 875 | 1.26117e-44 |
| VVGFCFLDLASNYEPPESLVKWLEDGDKPIYVGFGSLPVQDPKTMTEIIVEALETTGQRGIISKGWGGLGDLTEPKDSIYLLDNVPHDWLFLHCKAVVHH GGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHDRGVGPPPIPIDVFSLPKLIAAINFMLDPKVKEHAIELAKAMENEDGVTGAVKVF | |||
| Full Sequence |
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| Protein Sequence Length: 907 Download |
| MAELPENCWR YSSGSSSSSD QSIRVEHEIG TGNESTGQEI VDSTDAVSFG VSSCESSSSK 60 SGIPRKGLHK ATTMPVDISH GDKLESSPSK FKLERSKSDR QRHLRPEDAA QIFNDKIPVQ 120 EKLRLLNKIA TVKDDGTVEF DVPIDVEPEA LGAGSAHVNN DIDDSHDATD LDHIPPLNIV 180 MLIVGTRGDV QPFVAIGKRL QDYGHRVRLA THSNFKEFVL TAGLEFYPLG GDPKVLAGYM 240 VKNKGFLPSG PSEIPVQRNQ MKEIINSLLP ACKEPDIDSG VRFKADAIMA NPTALAHTHV 300 AEALQIPIHI FFTMPWSPTA DFPHPLSRIK QQAGYRVSYQ IVDLLIWLGM RDMVNDLRKK 360 RLKLRPVTYL SGSQGFETDI PHAYMWSPHL VPKPKASPLP SLSLDYMLFV PECPFDLISI 420 CKLTYSLNCS IHLLMTLSLY KTKVQQRQFE QALNHRVLYH LQSPSSTVST IHRRLGHPNM 480 DDIVIIGIDQ EGIKDLNQHL FSHFQTKDIG RLRYFLGIVA QPQEGIAIFQ GKYVLDIYEE 540 TGSFKESRIL TQGTYRRLIG RLNYLTMTRP DISFDGSVVS QLLNSPCDSH WNVVVVRIMR 600 YVKGHLKKGP AYSDRGHINT VGYSYAYWAS DVNVRRSTSD YCSLIEDLFY SFPSLVISFV 660 RDSLLYLNVQ SLVYFQKTYS DWGPKIDVVG FCFLDLASNY EPPESLVKWL EDGDKPIYVG 720 FGSLPVQDPK TMTEIIVEAL ETTGQRGIIS KGWGGLGDLT EPKDSIYLLD NVPHDWLFLH 780 CKAVVHHGGA GTTAAGLKAA CPTTIVPFFG DQPFWGERVH DRGVGPPPIP IDVFSLPKLI 840 AAINFMLDPK VKEHAIELAK AMENEDGVTG AVKVFFKQLP KNKPEPNTEP SSSSCFSYIA 900 RCFGYS* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG1819 | COG1819 | 3.0e-10 | 179 | 331 | 155 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] |
| COG1819 | COG1819 | 6.0e-19 | 699 | 874 | 178 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] |
| pfam03033 | Glyco_transf_28 | 1.0e-33 | 179 | 320 | 142 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. |
| cd03784 | GT1_Gtf_like | 1.0e-44 | 178 | 389 | 212 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| cd03784 | GT1_Gtf_like | 2.0e-56 | 665 | 875 | 211 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22617.1 | 0 | 4 | 395 | 1 | 378 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| DDBJ | BAC22617.1 | 0 | 681 | 906 | 379 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| EMBL | CBI37267.1 | 0 | 1 | 395 | 1 | 390 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002521125.1 | 0 | 20 | 395 | 20 | 399 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| RefSeq | XP_002521125.1 | 0 | 681 | 906 | 400 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 2e-25 | 706 | 883 | 213 | 385 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3h4t_A | 0.001 | 177 | 315 | 1 | 126 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3h4i_A | 2e-25 | 706 | 883 | 213 | 385 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 3h4i_A | 0.001 | 177 | 315 | 1 | 126 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1iir_A | 3e-21 | 706 | 884 | 230 | 403 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO260617 | 287 | 103 | 389 | 0 |
| DY295142 | 322 | 73 | 389 | 0 |
| FC882701 | 290 | 73 | 357 | 0 |
| EV274805 | 238 | 93 | 330 | 0 |
| DY295142 | 85 | 689 | 773 | 0.055 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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