| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr4g037140.1 |
| Family | GH9 |
| Protein Properties | Length: 187 Molecular Weight: 21069.2 Isoelectric Point: 9.3883 |
| Chromosome | Chromosome/Scaffold: 4 Start: 11600968 End: 11601610 |
| Description | cellulase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH9 | 24 | 159 | 2.6e-33 |
| LPASNLQYVTSITFLLTTYSKYMAATKHTFNCGGVFVTPNTLRTVAKRQVDNILGENPLRMSYMVGYGPYFPKRIHHRGSSLPSLSVHPQTIGCDGGFNP FFHSMNQNPNILVGAIVGGPNQNDGFPDDRGDYSQS | |||
| Full Sequence |
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| Protein Sequence Length: 187 Download |
| MMQYPPTNWM LVNVHHTQLL MFKLPASNLQ YVTSITFLLT TYSKYMAATK HTFNCGGVFV 60 TPNTLRTVAK RQVDNILGEN PLRMSYMVGY GPYFPKRIHH RGSSLPSLSV HPQTIGCDGG 120 FNPFFHSMNQ NPNILVGAIV GGPNQNDGFP DDRGDYSQSL RTSNLHQWWD CWTFSVLLPV 180 AINVRF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 6.0e-52 | 20 | 159 | 141 | + endoglucanase | ||
| PLN03009 | PLN03009 | 2.0e-52 | 20 | 163 | 144 | + cellulase | ||
| PLN02308 | PLN02308 | 2.0e-57 | 10 | 163 | 160 | + endoglucanase | ||
| PLN02175 | PLN02175 | 8.0e-67 | 20 | 159 | 140 | + endoglucanase | ||
| PLN02266 | PLN02266 | 2.0e-68 | 20 | 159 | 140 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAA96135.1 | 0 | 20 | 159 | 326 | 465 | endo-1,4-beta-glucanase [Pisum sativum] |
| GenBank | AAB65156.1 | 0 | 20 | 159 | 326 | 465 | basic cellulase [Citrus sinensis] |
| GenBank | AAQ55294.1 | 0 | 20 | 159 | 335 | 474 | endo-1,4-beta-glucanase [Malus x domestica] |
| GenBank | AAT75042.1 | 0 | 20 | 159 | 325 | 464 | Cel9B [Populus tremula x Populus tremuloides] |
| GenBank | ACU19501.1 | 0 | 20 | 158 | 90 | 228 | unknown [Glycine max] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0.00000000002 | 60 | 156 | 322 | 408 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
| PDB | 1ksc_A | 0.00000000002 | 60 | 156 | 322 | 408 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
| PDB | 1ks8_A | 0.00000000002 | 60 | 156 | 322 | 408 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ia7_A | 0.00000000003 | 64 | 156 | 328 | 406 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ia6_A | 0.00000000003 | 64 | 156 | 328 | 406 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FG996221 | 138 | 21 | 158 | 0 |
| CX653604 | 140 | 20 | 159 | 0 |
| DT512795 | 140 | 20 | 159 | 0 |
| DT508178 | 140 | 20 | 159 | 0 |
| CX655743 | 140 | 20 | 159 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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