Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g043760.1 |
Family | GH5 |
Protein Properties | Length: 412 Molecular Weight: 46669.8 Isoelectric Point: 6.3176 |
Chromosome | Chromosome/Scaffold: 4 Start: 13274582 End: 13276813 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 45 | 370 | 4.5e-34 |
NGSPFLFNGFNSYWMMNVASDPNQRYRVSNVFQKASAAGLTICRTWAFSDGGNQSLQISPGLYNEQMFQALDFVIGEAKKNGVRLILSLVNNYKDFGGRP QYVEWANSTGIPVNNDDDFYTNHVIKGYYKNHVKTVLTRINTITKIAYKDEPTIMAWELINEPRCQVDYSGKIINEWVKEMAPYVKSIDKKHLLEVGLEG FYGDSIPDRKQYNPGFQVGSDFVSNNLVKDIDFGTIHAYPDNWLAGQNDTMQMEFMQRWITSHLQDSRTILKKPLVFTEFGMSKNDSGYSIEARDSFMNT VYSSIYSLAQNGGTFAGGLVWQLLDE |
Full Sequence |
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Protein Sequence Length: 412 Download |
MTSIIKNLFS IYMVFHLIST LACEARSLRV TPNFVQRKGT EFMLNGSPFL FNGFNSYWMM 60 NVASDPNQRY RVSNVFQKAS AAGLTICRTW AFSDGGNQSL QISPGLYNEQ MFQALDFVIG 120 EAKKNGVRLI LSLVNNYKDF GGRPQYVEWA NSTGIPVNND DDFYTNHVIK GYYKNHVKTV 180 LTRINTITKI AYKDEPTIMA WELINEPRCQ VDYSGKIINE WVKEMAPYVK SIDKKHLLEV 240 GLEGFYGDSI PDRKQYNPGF QVGSDFVSNN LVKDIDFGTI HAYPDNWLAG QNDTMQMEFM 300 QRWITSHLQD SRTILKKPLV FTEFGMSKND SGYSIEARDS FMNTVYSSIY SLAQNGGTFA 360 GGLVWQLLDE GMDSYDDGYE IVLTQNPSTS SVISQQSSKM IALEHTLSNK H* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 2.0e-7 | 45 | 345 | 303 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-28 | 42 | 379 | 344 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN34823.1 | 0 | 31 | 407 | 34 | 410 | endo-beta-mannanase [Daucus carota] |
EMBL | CAC08208.1 | 0 | 9 | 410 | 12 | 413 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
RefSeq | XP_002270023.1 | 0 | 12 | 405 | 10 | 402 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272344.1 | 0 | 17 | 405 | 15 | 401 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272567.1 | 0 | 23 | 405 | 21 | 402 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 33 | 403 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 43 | 379 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 43 | 379 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 43 | 379 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 43 | 379 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |