Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g076440.1 |
Family | GH17 |
Protein Properties | Length: 330 Molecular Weight: 36466.4 Isoelectric Point: 9.1819 |
Chromosome | Chromosome/Scaffold: 4 Start: 24693669 End: 24695876 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 23 | 328 | 0 |
IGVCYGMIGNNLPSRQDVVNLYRSRGINQMRLYFPDEQALQALRGSNIELILDVARETLNSLRNANEATNWVNRYVKPYARDVKIKYITVGNEIKPYDSE AQSILPAMQNIQNAISAANLQGQIKVSIAIDMTLIGNSYPPNNGVFTDQAKPYIQPIINFLKNNGAPLLANVYPYFAYINNKQSISLDYALFRQQGNNQV GYRNLFDAQLDSVYAALEKVGASGVKIVVSESGWPSAGGDSASTDNAATYYRNLINHVRNGTPKRPGAIETYLFAMFDENQKTGAATEQHFGLFNPNRTP KYQISF |
Full Sequence |
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Protein Sequence Length: 330 Download |
MSIIFLLVGI LSIGLKLTAV ESIGVCYGMI GNNLPSRQDV VNLYRSRGIN QMRLYFPDEQ 60 ALQALRGSNI ELILDVARET LNSLRNANEA TNWVNRYVKP YARDVKIKYI TVGNEIKPYD 120 SEAQSILPAM QNIQNAISAA NLQGQIKVSI AIDMTLIGNS YPPNNGVFTD QAKPYIQPII 180 NFLKNNGAPL LANVYPYFAY INNKQSISLD YALFRQQGNN QVGYRNLFDA QLDSVYAALE 240 KVGASGVKIV VSESGWPSAG GDSASTDNAA TYYRNLINHV RNGTPKRPGA IETYLFAMFD 300 ENQKTGAATE QHFGLFNPNR TPKYQISFN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-7 | 152 | 320 | 183 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-152 | 23 | 328 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAR26001.1 | 0 | 14 | 329 | 24 | 340 | endo-1,3-beta-glucanase [Glycine max] |
GenBank | ACU20860.1 | 0 | 14 | 329 | 24 | 340 | unknown [Glycine max] |
DDBJ | BAE53383.1 | 0 | 1 | 329 | 13 | 343 | beta-1,3-glucanase [Sesbania rostrata] |
DDBJ | BAE53384.1 | 0 | 17 | 329 | 27 | 339 | beta-1,3-glucanase [Sesbania rostrata] |
EMBL | CAA10167.1 | 0 | 1 | 329 | 1 | 331 | glucan endo-1,3-beta-d-glucosidase [Cicer arietinum] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 21 | 329 | 1 | 315 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
PDB | 3ur8_A | 0 | 21 | 329 | 1 | 315 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
PDB | 3ur7_B | 0 | 21 | 329 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 21 | 329 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 21 | 329 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |