Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g076470.1 |
Family | GH17 |
Protein Properties | Length: 330 Molecular Weight: 36022.4 Isoelectric Point: 4.48 |
Chromosome | Chromosome/Scaffold: 4 Start: 24702955 End: 24706563 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 23 | 328 | 0 |
VGVCYGVLGNNLPSSQEVVDLYKSNGIDKMRIYFPDEQALQALKGSNIELILDVAKETLSSLTDGNEATNWVQKYVTPYAQDVKIKYITVGNEIKPNDNE AQYIATAMQNIQNAISSANLQGQIKVSTAIDMTLIGTSYPPNDGAFTDQAKQYLQPIIDFLKNNGAPLLANVYPYFAYIGNKQSISLDYALFKQQGNNDV GYQNLFDAQLDSVYAALEKVGGTDVKIVVSESGWPSDGGDSASTDNASTYYQNLINHVKNGTPKRPGAIETYLFAMFDENQKTGAATEQHFGLFNPDKSS KYQTSF |
Full Sequence |
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Protein Sequence Length: 330 Download |
MSIIFLLVGI LSIGLKFTVV QSVGVCYGVL GNNLPSSQEV VDLYKSNGID KMRIYFPDEQ 60 ALQALKGSNI ELILDVAKET LSSLTDGNEA TNWVQKYVTP YAQDVKIKYI TVGNEIKPND 120 NEAQYIATAM QNIQNAISSA NLQGQIKVST AIDMTLIGTS YPPNDGAFTD QAKQYLQPII 180 DFLKNNGAPL LANVYPYFAY IGNKQSISLD YALFKQQGNN DVGYQNLFDA QLDSVYAALE 240 KVGGTDVKIV VSESGWPSDG GDSASTDNAS TYYQNLINHV KNGTPKRPGA IETYLFAMFD 300 ENQKTGAATE QHFGLFNPDK SSKYQTSFN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-8 | 51 | 320 | 281 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 8.0e-147 | 23 | 328 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAR26001.1 | 0 | 14 | 329 | 24 | 340 | endo-1,3-beta-glucanase [Glycine max] |
GenBank | ACU20860.1 | 0 | 14 | 329 | 24 | 340 | unknown [Glycine max] |
DDBJ | BAE53383.1 | 0 | 1 | 329 | 13 | 343 | beta-1,3-glucanase [Sesbania rostrata] |
DDBJ | BAE53384.1 | 0 | 17 | 329 | 27 | 339 | beta-1,3-glucanase [Sesbania rostrata] |
EMBL | CAA10167.1 | 0 | 1 | 329 | 1 | 331 | glucan endo-1,3-beta-d-glucosidase [Cicer arietinum] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 21 | 329 | 1 | 315 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
PDB | 3ur8_A | 0 | 21 | 329 | 1 | 315 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
PDB | 3ur7_B | 0 | 21 | 329 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 21 | 329 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 21 | 329 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |