Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g076490.1 |
Family | GH17 |
Protein Properties | Length: 399 Molecular Weight: 43657.5 Isoelectric Point: 5.4186 |
Chromosome | Chromosome/Scaffold: 4 Start: 24709961 End: 24716716 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 75 | 378 | 0 |
GVCYGVLGNNLPSKQEVVDLYKSKGIGKMRIYYPDQEVLQALRGSNIELILGVTKETLSSLTDAGEATNWVQKYVTPYAQDVKIKYITVGNEIKPNDNEA QYIATAMQNIQNAISSANLQGQIKVSTAIDMTLIGNSYPPNAGVFTDQANSYIQPIINFLVKNGAPLLANVYPYFAYIGNKQSISLDYVLFKQQGNNEVG YNNIFDAMLDSVYAALEKVGGSNVKIVVSESGWPSKGGDSASIDNAATYYSNLINHIKNGTPKRPGAAIETYLFAMFDENQKTGATTEQHYGLFNPDKSP KYHV |
Full Sequence |
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Protein Sequence Length: 399 Download |
MVPCALGSFQ LRVWGNGVDF QPKLTQNSTC KYSSSHSQLF IQNEAVQEEE TLPSIMSIIF 60 LLVGILLSIG LQFTGVCYGV LGNNLPSKQE VVDLYKSKGI GKMRIYYPDQ EVLQALRGSN 120 IELILGVTKE TLSSLTDAGE ATNWVQKYVT PYAQDVKIKY ITVGNEIKPN DNEAQYIATA 180 MQNIQNAISS ANLQGQIKVS TAIDMTLIGN SYPPNAGVFT DQANSYIQPI INFLVKNGAP 240 LLANVYPYFA YIGNKQSISL DYVLFKQQGN NEVGYNNIFD AMLDSVYAAL EKVGGSNVKI 300 VVSESGWPSK GGDSASIDNA ATYYSNLINH IKNGTPKRPG AAIETYLFAM FDENQKTGAT 360 TEQHYGLFNP DKSPKYHVAQ SGIELDTTRN ITVILNMK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-8 | 69 | 372 | 321 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-148 | 75 | 378 | 308 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAR26001.1 | 0 | 70 | 379 | 29 | 338 | endo-1,3-beta-glucanase [Glycine max] |
GenBank | ACU20860.1 | 0 | 70 | 379 | 29 | 338 | unknown [Glycine max] |
DDBJ | BAE53383.1 | 0 | 54 | 379 | 11 | 341 | beta-1,3-glucanase [Sesbania rostrata] |
DDBJ | BAE53384.1 | 0 | 70 | 379 | 29 | 337 | beta-1,3-glucanase [Sesbania rostrata] |
EMBL | CAA10167.1 | 0 | 56 | 378 | 1 | 328 | glucan endo-1,3-beta-d-glucosidase [Cicer arietinum] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 75 | 378 | 3 | 313 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3f55_C | 0 | 75 | 378 | 3 | 313 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3f55_B | 0 | 75 | 378 | 3 | 313 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3f55_A | 0 | 75 | 378 | 3 | 313 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3em5_D | 0 | 75 | 378 | 3 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX526821 | 305 | 54 | 353 | 0 |
HO779722 | 314 | 66 | 379 | 0 |
EV254861 | 254 | 49 | 297 | 0 |
BG647231 | 246 | 50 | 290 | 0 |
GW327268 | 267 | 113 | 379 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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