Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr4g076500.1 |
Family | GH17 |
Protein Properties | Length: 374 Molecular Weight: 40856.2 Isoelectric Point: 6.5133 |
Chromosome | Chromosome/Scaffold: 4 Start: 24718092 End: 24719582 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 60 | 371 | 0 |
IGACYGQVANNLPPVAFVINMFEQNIIHKMRIYNPDQATLEASRGSLLSLVIGVPNEDIQSIANDISSANNWVQNNILKYTPGVNFRYIVVGNEINPSND PTSQFVLRAMQNIYSALASANLQNQIKISTAINMGLLGSSYPPSAGAFSASAIPYITSIVGFLVNTEAPLLANVHPYFAYIGDPQNIPLDFALFKQQGNN AVGYQNLFDAQLDSVYAALEKVGGSSVKIVVSESGWPSAGGDVATIENARTYYSNLINHANSGNGTPLRPGQAIETYLFAMFDENQKPGAATEQHFGLFN PVGTSPKYILSF |
Full Sequence |
---|
Protein Sequence Length: 374 Download |
MNKTLNDFHS PNVFTMFPNP RELYSKTFNP KVISFDFPSF SLYNLTFKIC KEHLYKAQSI 60 GACYGQVANN LPPVAFVINM FEQNIIHKMR IYNPDQATLE ASRGSLLSLV IGVPNEDIQS 120 IANDISSANN WVQNNILKYT PGVNFRYIVV GNEINPSNDP TSQFVLRAMQ NIYSALASAN 180 LQNQIKISTA INMGLLGSSY PPSAGAFSAS AIPYITSIVG FLVNTEAPLL ANVHPYFAYI 240 GDPQNIPLDF ALFKQQGNNA VGYQNLFDAQ LDSVYAALEK VGGSSVKIVV SESGWPSAGG 300 DVATIENART YYSNLINHAN SGNGTPLRPG QAIETYLFAM FDENQKPGAA TEQHFGLFNP 360 VGTSPKYILS FNK* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-5 | 87 | 359 | 281 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-123 | 60 | 371 | 315 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU20860.1 | 0 | 57 | 372 | 30 | 340 | unknown [Glycine max] |
DDBJ | BAE53384.1 | 0 | 57 | 372 | 30 | 339 | beta-1,3-glucanase [Sesbania rostrata] |
Swiss-Prot | P52399 | 0 | 37 | 372 | 9 | 343 | E13L_TOBAC RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform GL153; AltName: Full=(1- |
RefSeq | XP_002299791.1 | 0 | 49 | 371 | 17 | 337 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336706.1 | 0 | 53 | 371 | 6 | 322 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 58 | 372 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3ur8_A | 0 | 58 | 372 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3ur7_B | 0 | 58 | 372 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 58 | 372 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 58 | 372 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO779722 | 319 | 54 | 372 | 0 |
HO781618 | 340 | 39 | 371 | 0 |
DY932502 | 305 | 60 | 360 | 0 |
DY932509 | 303 | 60 | 358 | 0 |
GW327268 | 274 | 99 | 372 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|