Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g083070.1 |
Family | CBM43 |
Protein Properties | Length: 196 Molecular Weight: 19439.8 Isoelectric Point: 7.0904 |
Chromosome | Chromosome/Scaffold: 4 Start: 28276990 End: 28278744 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 22 | 100 | 3.7e-30 |
CVCKDGVSSQLLQKAIDYACGTGADCSPILQNGPCFQPNTVKDHCNYAVNSYYQRKGNVQGSCDFAGAAAPTQTPPTAA |
Full Sequence |
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Protein Sequence Length: 196 Download |
MAFLVYFLIF LSLTGHSSAL YCVCKDGVSS QLLQKAIDYA CGTGADCSPI LQNGPCFQPN 60 TVKDHCNYAV NSYYQRKGNV QGSCDFAGAA APTQTPPTAA SGCVYPSSPG YNAGTPSTGS 120 PGSTPGTGTG TGTGTGTGTG TGTGTGSTAG SPNVIGISPS STIDGSSAAG ESCMKNTNTI 180 LLLSLVITMC LAFKV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 6.0e-20 | 20 | 86 | 72 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-28 | 20 | 86 | 67 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14053.1 | 0 | 1 | 115 | 1 | 114 | unknown [Glycine max] |
GenBank | ACU19899.1 | 0 | 1 | 117 | 1 | 117 | unknown [Glycine max] |
GenBank | ACU20773.1 | 0 | 1 | 115 | 1 | 114 | unknown [Glycine max] |
EMBL | CAN73948.1 | 0 | 1 | 108 | 1 | 109 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27282.1 | 0 | 1 | 108 | 1 | 109 | unnamed protein product [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-17 | 21 | 107 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |