| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr4g083210.1 |
| Family | AA1 |
| Protein Properties | Length: 546 Molecular Weight: 61225.7 Isoelectric Point: 8.8399 |
| Chromosome | Chromosome/Scaffold: 4 Start: 28338406 End: 28340043 |
| Description | SKU5 similar 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 44 | 497 | 0 |
| KGILINGQFPGPEINGTSNNNIVVNVFNNLDEPLLFTWSGIQQRKNSWADGTSGVQCPIAPGTNYTYKFQVKDQIGSYFYYPTTGLMRAAGGIGGIRVYS RLLIPVPYADPADEYWVLMGDWYGKSHTQLQKFLDSGRSMGRPDGVHIMGKSNSAEPLYKMEPGKTYKYRLCNVGLKDSLNFRIQDHPMKLVEMEGSHTV QNVYDSLDVHVGQCFSVLVTADKEPKQYKMVASTRFTKTVLTTTAVISYTNGNGPASPVLPPAPVGWAWSLNQVRSFRWNLTASAARPNPQGSYHYGQIN ITRTIKLVNNPFNIDGKLRYTLNGVSHEDDETPLKLAEYYGVANKVFQYDLTSDNPPAVIGNLRVEANVLNVTFRTFVEIIFENPTKVIQSYNLDGYSFF AVAVEPGKWTPEKRKNYNLLDAVSRHTVQVFPKSWAAIMLTFDNAGMWNLRSEM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 546 Download |
| MTRGAIIALM VCLMATAVRS EDPYVYYTWK VTYGNIAPLG TPQKGILING QFPGPEINGT 60 SNNNIVVNVF NNLDEPLLFT WSGIQQRKNS WADGTSGVQC PIAPGTNYTY KFQVKDQIGS 120 YFYYPTTGLM RAAGGIGGIR VYSRLLIPVP YADPADEYWV LMGDWYGKSH TQLQKFLDSG 180 RSMGRPDGVH IMGKSNSAEP LYKMEPGKTY KYRLCNVGLK DSLNFRIQDH PMKLVEMEGS 240 HTVQNVYDSL DVHVGQCFSV LVTADKEPKQ YKMVASTRFT KTVLTTTAVI SYTNGNGPAS 300 PVLPPAPVGW AWSLNQVRSF RWNLTASAAR PNPQGSYHYG QINITRTIKL VNNPFNIDGK 360 LRYTLNGVSH EDDETPLKLA EYYGVANKVF QYDLTSDNPP AVIGNLRVEA NVLNVTFRTF 420 VEIIFENPTK VIQSYNLDGY SFFAVAVEPG KWTPEKRKNY NLLDAVSRHT VQVFPKSWAA 480 IMLTFDNAGM WNLRSEMAEN RYLGQQMYMS VLSPEKSNRD EYNLPDTHQV CGIVKDMPRP 540 ALQYT* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 0 | 1 | 540 | 547 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 8 | 532 | 526 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 2 | 532 | 531 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 9 | 532 | 526 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 23 | 535 | 525 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA47177.1 | 0 | 21 | 544 | 24 | 552 | Bplo [Brassica napus] |
| RefSeq | NP_175953.1 | 0 | 3 | 539 | 2 | 548 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002297609.1 | 0 | 4 | 540 | 3 | 548 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002299087.1 | 0 | 4 | 540 | 3 | 546 | hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa] |
| RefSeq | XP_002303974.1 | 0 | 4 | 541 | 3 | 549 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 26 | 504 | 5 | 516 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 1asq_A | 0 | 26 | 504 | 5 | 516 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 1asp_B | 0 | 26 | 504 | 5 | 516 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 1asp_A | 0 | 26 | 504 | 5 | 516 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 1aso_B | 0 | 26 | 504 | 5 | 516 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
