CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr4g083590.1
FamilyGT65
Protein PropertiesLength: 426 Molecular Weight: 48824.7 Isoelectric Point: 8.6448
ChromosomeChromosome/Scaffold: 4 Start: 28568751 End: 28570865
DescriptionO-fucosyltransferase family protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT65723730
  GLNNQKIAFARACLTARMLNRTLLMPSLSASLFYKEIDLLQPISFDKVFQFDKFNELCSGFVQLGRYSDLLNRTQVVELQKGSGRKWTVQRDLDQLRQYK
  NGSFDDIEVIKIDGKNPFLWHDHWPVKDYAKVFECLVLVDEFTQEADRVASMIRKVGSHDDKGNSFQNYVPYVAVHMRVEIDWTIHCKKLEQRLNTNQIC
  SSKNEIMERVGNIEGLNKNQVVLYLAVADKLLQNSSILEGWKEGFLPFEKKKLGVDKIYAKYPYLIQSAIDYEVCLRADIFVGNSFSTFSSLIVLERTQK
  MI
Full Sequence
Protein Sequence     Length: 426     Download
MEFLFNCKLI KLMGGGNLNS LVCKIVFLFI AVLILRAFLL PQNLVFMSKN VSSYGFVVQQ    60
QKFLEVPQIV WGLNNQKIAF ARACLTARML NRTLLMPSLS ASLFYKEIDL LQPISFDKVF    120
QFDKFNELCS GFVQLGRYSD LLNRTQVVEL QKGSGRKWTV QRDLDQLRQY KNGSFDDIEV    180
IKIDGKNPFL WHDHWPVKDY AKVFECLVLV DEFTQEADRV ASMIRKVGSH DDKGNSFQNY    240
VPYVAVHMRV EIDWTIHCKK LEQRLNTNQI CSSKNEIMER VGNIEGLNKN QVVLYLAVAD    300
KLLQNSSILE GWKEGFLPFE KKKLGVDKIY AKYPYLIQSA IDYEVCLRAD IFVGNSFSTF    360
SSLIVLERTQ KMIKLGVNEM CGSDVRWPSF AYNIKGELNG PMRWVTNMSD SSLHAISYGT    420
NHISC* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd11296O-FucT_like0.0002639735+
cd11302O-FucT-17.0e-5242368146+
cd11299O-FucT_plant5.0e-1372369326+
cd11296O-FucT_like8.0e-20193369181+
pfam10250O-FucT2.0e-3972369329+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_187183.302042516442unknown protein [Arabidopsis thaliana]
RefSeqXP_002273827.10214251427PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002321799.10894251347predicted protein [Populus trichocarpa]
RefSeqXP_002332132.10894251347predicted protein [Populus trichocarpa]
RefSeqXP_002531235.105242565446conserved hypothetical protein [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3zy6_A0.0001242368212344A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3zy5_A0.0001242368212344A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3zy4_A0.0001242368212344A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3zy3_B0.0001242368212344A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3zy3_A0.0001242368212344A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Transmembrane Domains
StartEnd
2140
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DW5174702671734260
GO8579223051324250
DW5173972501734090
GW9648112261994240
FK000039226432570
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_035_00086.1
Arabidopsis lyrata477820
Arabidopsis thalianaAT3G05320.1
Brachypodium distachyonBradi3g05130.1
Brassica rapaBra040646.99.283Bra040646.99.283
Capsella rubellaCarubv10013700mCarubv10013656m
Citrus clementinaCiclev10015216m
Citrus sinensisorange1.1g013043m
Cucumis sativusCucsa.236440.1
Eucalyptus grandisEucgr.H03600.1
Fragaria vescamrna20066.1-v1.0-hybrid
Glycine maxGlyma07g34965.1.189.378Glyma07g34965.1.189.378Glyma07g34965.2.189.378Glyma15g13250.1Glyma20g02800.2
Glyma20g02800.3Glyma09g02350.2Glyma07g34965.2.189.378Glyma09g02350.3Glyma07g34965.3.189.378
Glyma07g34965.3.189.378Glyma07g34965.1.70.189Glyma07g34965.1.70.189Glyma07g34965.2.70.189Glyma07g34965.2.70.189
Glyma07g34965.3.70.189Glyma07g34965.3.70.189
Gossypium raimondiiGorai.009G150500.1.203.398Gorai.011G050000.1Gorai.011G049800.1Gorai.010G169400.1Gorai.010G169400.2
Gorai.009G150500.1.84.201Gorai.009G150500.1.84.201Gorai.009G150500.1.203.398
Linum usitatissimumLus10018291Lus10040618
Malus domesticaMDP0000794968.202.395MDP0000218405.202.395MDP0000218405.202.395MDP0000794968.202.395MDP0000218405.83.200
MDP0000218405.83.200MDP0000794968.83.200MDP0000794968.83.200MDP0000292513
Manihot esculentacassava4.1_007711m
Medicago truncatulaMedtr2g028900.1
Mimulus guttatusmgv1a024556m.157.260mgv1a024556m.157.260mgv1a010727m
Oryza sativaLOC_Os02g07200.1LOC_Os02g07200.3LOC_Os02g07200.2
Panicum virgatumPavirv00064034mPavirv00047509m
Phaseolus vulgarisPhvul.006G131800.1.76.195Phvul.006G131600.2Phvul.006G131600.1Phvul.006G131800.1.76.195Phvul.006G131800.1.195.389
Phvul.006G131800.1.195.389
Picea abiesMA_458283g0010MA_730174g0010MA_10435476g0010
Populus trichocarpaPotri.015G117500.1Potri.012G118800.1
Prunus persicappa005601m
Ricinus communis30109.m000167
Setaria italicaSi020158m
Selaginella moellendorffii130392.157.337130392.157.337130392.42.158130392.42.158
Sorghum bicolorSb04g004590.1
Thellungiella halophilaThhalv10020752m.197.381Thhalv10020752m.197.381Thhalv10020752m.78.198Thhalv10020752m.78.198
Vitis viniferaGSVIVT01026258001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny