Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g087970.1 |
Family | CE8 |
Protein Properties | Length: 520 Molecular Weight: 57109.3 Isoelectric Point: 6.7704 |
Chromosome | Chromosome/Scaffold: 4 Start: 30519357 End: 30521646 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 207 | 500 | 0 |
AIVAADGSGNYTTVMDAVLAAPKFSMRRYVIYVKKGVYVENVEIDRKKWNIMMIGEGMDATIISGSRNRVDGWTTFRSATFAVNGRGFIACNISFQNTAG PEKEQAVALRSDSDLSVFYRCGIFGYQDSLYTHTQRQFYKACKITGTVDFIFGNGTVMFQNCEILAKKGMQGQKNTVAAHGRTDPNVTTGFSFQFCNISA DFDLLPFIATIRTYLGRPWRPYSRTIFMQSYMSNAISPEGWLEYNGSVGLDTLYYSEYMNSGPGAGVANRVKWSGYHVMNDSSEAEKFTVAQFI |
Full Sequence |
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Protein Sequence Length: 520 Download |
MELCSSKQPS TTTLSITSFI FFFLLLSLPH STSASSPNNF VGSSLRVSPT KFSNSANEVK 60 TVLQKVTSIL STFTYTFSHH SNAISDCLDL LDMSSDQLSW SVSATQNPKG KNNSTGNLSS 120 DLRTWLSAVL VNTDTCLEGL QGLQSTFAKS DVSSGLDRVL SLVKKNLFEV VLSNDQLATA 180 TSEDRFPSWI NDGDKKFFEA NETTADAIVA ADGSGNYTTV MDAVLAAPKF SMRRYVIYVK 240 KGVYVENVEI DRKKWNIMMI GEGMDATIIS GSRNRVDGWT TFRSATFAVN GRGFIACNIS 300 FQNTAGPEKE QAVALRSDSD LSVFYRCGIF GYQDSLYTHT QRQFYKACKI TGTVDFIFGN 360 GTVMFQNCEI LAKKGMQGQK NTVAAHGRTD PNVTTGFSFQ FCNISADFDL LPFIATIRTY 420 LGRPWRPYSR TIFMQSYMSN AISPEGWLEY NGSVGLDTLY YSEYMNSGPG AGVANRVKWS 480 GYHVMNDSSE AEKFTVAQFI LGDLWLPSAG VTYTAGLTV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02506 | PLN02506 | 9.0e-151 | 100 | 517 | 428 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 3.0e-151 | 114 | 519 | 421 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-170 | 113 | 517 | 410 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 30 | 519 | 504 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 206 | 503 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92470.1 | 0 | 33 | 519 | 33 | 528 | unknown [Populus trichocarpa] |
DDBJ | BAF42041.1 | 0 | 33 | 517 | 25 | 507 | pectin methylesterase 4 [Pyrus communis] |
RefSeq | NP_189913.3 | 0 | 19 | 517 | 12 | 525 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q43062 | 0 | 33 | 519 | 37 | 522 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 33 | 519 | 25 | 520 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 205 | 517 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 199 | 517 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 1e-24 | 203 | 508 | 2 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-24 | 203 | 508 | 2 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-24 | 203 | 508 | 2 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |