CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr4g097110.1
FamilyGH43
Protein PropertiesLength: 466 Molecular Weight: 53875.7 Isoelectric Point: 9.2488
ChromosomeChromosome/Scaffold: 4 Start: 33489685 End: 33492212
Descriptionglycosyl hydrolase family protein 43
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH431523765.3e-33
  CILYDENSSTYYWYGEYKDGPTYLHNNKGPARVDIIGVGCYSSKDLWTWKKEGIALAAEKTDKTHDLHKSNVLERPKVIYNEKTRKYVMWMHIDNANYAK
  ATVGIAFSDTPTGPFKYLGSQRPHRYQSRDMTLFKDEDNVAYLIYSSEENNVMHIGPLTEDYLNVTSVMKRIFVGQRREAPAMFKHKGTYYMVTSGCTGW
  APNEALVHSAETILGTWETIGNPCV
Full Sequence
Protein Sequence     Length: 466     Download
MRMKNLYKKP ITNLRCSSWS RYCSISLVIL WTLLILGCIL LLHLYSNNNT SLNIIHPPPL    60
PSHFHQLQHV EKENFQIPPP NKKRSPQSKS ITPLVDEFLD QDSSLRHVFF PHKTIDPMKT    120
IGKGKNDSYN YYYPGKIWLD TDGNPIQAHG GCILYDENSS TYYWYGEYKD GPTYLHNNKG    180
PARVDIIGVG CYSSKDLWTW KKEGIALAAE KTDKTHDLHK SNVLERPKVI YNEKTRKYVM    240
WMHIDNANYA KATVGIAFSD TPTGPFKYLG SQRPHRYQSR DMTLFKDEDN VAYLIYSSEE    300
NNVMHIGPLT EDYLNVTSVM KRIFVGQRRE APAMFKHKGT YYMVTSGCTG WAPNEALVHS    360
AETILGTWET IGNPCVAGNK MFRVSTFLAQ STFVLPLTRF PGLFIFMADR WNPSELRDSR    420
YVWLPLIVDG HEDQAFQYGF DNKLWPRVSI YWHKKWKLPL GWNTF* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd08999GH43_ABN_22.0e-12191374202+
cd08990GH43_AXH_like1.0e-13191369193+
cd09004GH43_bXyl2.0e-17161373227+
cd08978GH_F5.0e-40160426278+
cd08985GH43_62.0e-128146426282+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACU19498.106346560464unknown [Glycine max]
EMBLCBI33680.1014621430unnamed protein product [Vitis vinifera]
RefSeqNP_190557.1034594458glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqNP_201555.206645970466glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqXP_002525277.10146232495beta-glucanase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F013542645328B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB3vt2_E013542645328B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB3vt2_D013542645328B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB3vt2_C013542645328B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB3vt2_B013542645328B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
Transmembrane Domains
StartEnd
2345
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
BF0040592312364660
GO8561533311324620
EX5711522502174650
GO3743623451244630
GT7395993001314300
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi001388mSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny