Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g106370.1 |
Family | GH47 |
Protein Properties | Length: 571 Molecular Weight: 65199.4 Isoelectric Point: 6.8678 |
Chromosome | Chromosome/Scaffold: 4 Start: 36411379 End: 36416218 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 44 | 478 | 0 |
MFHHAYDNYMTHAFPHDELKPLTKTFTDSLSELGNLKLERLPQDYNGSALSLIESLSSLVIMGNNTEFEKGVRWLSENLKFDVDARINLFECNIRVLGGL VSAHLLASDSSKKLLQGSYKNELLGLAEDLGKRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSKLTGDPIYESVALRALRKLWS MQSLLKLFGTTLDVSTGQWIEHSSGIGAGVDSFYEYLLKAHILFGKEDYWRMFHSAYVAVQKHFRHGPWYHEADMRTGRATYWQLTSLQAFWPGLQVLIG DISAANSSHREFFYVWKKFGVLPERYLLDHQMLHPTEKYYPLRPEFAESTFYLYQATKDPWYIEVGELIVNSLNLHTRVEGGFASIKDVTTMQLEDHQHS FFLAETCKYLYLLFDDSFMVDSNYVFTTEGHPLPV |
Full Sequence |
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Protein Sequence Length: 571 Download |
MIPRRYFLTC LLIFLLVLST FSFSHSQPHW SSKKKRLGEK VRNMFHHAYD NYMTHAFPHD 60 ELKPLTKTFT DSLSELGNLK LERLPQDYNG SALSLIESLS SLVIMGNNTE FEKGVRWLSE 120 NLKFDVDARI NLFECNIRVL GGLVSAHLLA SDSSKKLLQG SYKNELLGLA EDLGKRFLPA 180 FNTPTGLPYA WINLKYGVME NETTETSTSG CGSLILEMGA LSKLTGDPIY ESVALRALRK 240 LWSMQSLLKL FGTTLDVSTG QWIEHSSGIG AGVDSFYEYL LKAHILFGKE DYWRMFHSAY 300 VAVQKHFRHG PWYHEADMRT GRATYWQLTS LQAFWPGLQV LIGDISAANS SHREFFYVWK 360 KFGVLPERYL LDHQMLHPTE KYYPLRPEFA ESTFYLYQAT KDPWYIEVGE LIVNSLNLHT 420 RVEGGFASIK DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FMVDSNYVFT TEGHPLPVLS 480 TWHEELPQTY IPTNWTTLKR QPANRASAMS LQVCPAMTLN SGQHIESACH ISDVRSDHRC 540 LTDNDCGVDA TTCRRRSCSM AGYCGLWLFI * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 5.0e-78 | 31 | 478 | 484 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 3.0e-151 | 44 | 478 | 472 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_564288.1 | 0 | 3 | 567 | 7 | 571 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002280345.1 | 0 | 7 | 570 | 6 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318019.1 | 0 | 37 | 570 | 1 | 530 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321565.1 | 0 | 1 | 568 | 1 | 565 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511454.1 | 0 | 7 | 570 | 9 | 575 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 40 | 486 | 23 | 473 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayr_A | 0 | 35 | 464 | 11 | 420 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayq_A | 0 | 35 | 464 | 11 | 420 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayp_A | 0 | 35 | 464 | 11 | 420 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayo_A | 0 | 35 | 464 | 11 | 420 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |