Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g114380.1 |
Family | GT14 |
Protein Properties | Length: 293 Molecular Weight: 33938.7 Isoelectric Point: 6.6522 |
Chromosome | Chromosome/Scaffold: 4 Start: 39227123 End: 39229543 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 22 | 230 | 0 |
NFVRNEPLFAELGNVRMIVKANLVTYRGPTMVTNTLHAAALLFKEAGDWDWFINLSASDYPLLTQDDLLHTLSSIPRHLNFIEHTSDIGWKEDQRAKPVI IDPALYSVNKSDVFWVTEKRSVPTAYKLFTGSAWMMLSRQFVEYMLWGWDNLPRIVLMYYANFLSSPEGYFHTVICNAEEFRNTTVNHDLHFISWDNPPK QHPHFLTAE |
Full Sequence |
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Protein Sequence Length: 293 Download |
MNNIPWNIKI GILFQERLDL ANFVRNEPLF AELGNVRMIV KANLVTYRGP TMVTNTLHAA 60 ALLFKEAGDW DWFINLSASD YPLLTQDDLL HTLSSIPRHL NFIEHTSDIG WKEDQRAKPV 120 IIDPALYSVN KSDVFWVTEK RSVPTAYKLF TGSAWMMLSR QFVEYMLWGW DNLPRIVLMY 180 YANFLSSPEG YFHTVICNAE EFRNTTVNHD LHFISWDNPP KQHPHFLTAE HYWSMVESNA 240 PFGRKFGRNE PLLDKIDTEL LGRNADGYVP GMWFSHANPN ITKPYSFVKN NH* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 8.0e-61 | 29 | 236 | 212 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-157 | 15 | 275 | 261 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28190.1 | 0 | 5 | 273 | 172 | 445 | unnamed protein product [Vitis vinifera] |
GenBank | EAZ37565.1 | 0 | 16 | 283 | 14 | 281 | hypothetical protein OsJ_21895 [Oryza sativa Japonica Group] |
RefSeq | XP_002282083.1 | 0 | 15 | 291 | 121 | 397 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285159.1 | 0 | 5 | 290 | 106 | 397 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313551.1 | 0 | 15 | 290 | 118 | 397 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00005 | 35 | 196 | 138 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00005 | 35 | 196 | 138 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00005 | 35 | 196 | 138 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00005 | 35 | 196 | 138 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0001 | 35 | 196 | 138 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BQ124820 | 219 | 15 | 233 | 0 |
EB451733 | 248 | 16 | 263 | 0 |
BQ124699 | 206 | 15 | 220 | 0 |
CB891457 | 204 | 87 | 290 | 0 |
EB449441 | 276 | 15 | 290 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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