y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g115070.1 |
Family | GT17 |
Protein Properties | Length: 538 Molecular Weight: 62448.8 Isoelectric Point: 7.115 |
Chromosome | Chromosome/Scaffold: 4 Start: 39660114 End: 39669519 |
Description | beta-1,4-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT17 | 240 | 529 | 0 |
VSMDHLCHLHGWSLRSQPRRIYDAIIFSNELDLLEIRWHELYPYVSKFVILESNTTFTGIPKPLFFAINQERFAFAKQKVVHDLYPGRVAVHGSNEDPFV LESRQRGAMNTLLRRAGISNGDILLMSDTDEIPSPHTLKLLQWCDGIPPIMHLELRNYMYSFEFPVDYSSWRATAHVYGPRSNYRHSRQTDVIFSDAGWH CSFCFRYISEFVFKMTAYSHADRVKRRSFLSHSRIQDLICKGDDLFDMLPEEYSFQELIKKMGSIPRSASAVHLPAYLIENADKFKFLLP |
Full Sequence |
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Protein Sequence Length: 538 Download |
MELHLGLALS TYNNSHAYNI SSTKNHFPLN HDNKKRRFSQ LLEHAAETTN LPTLSLLPLT 60 PGHSDDHDHD DQHCSHSSTT TITKSNEDDE EALVGWPPVN CRRKKLRCNE NDVEDHVVPI 120 DGSHNHRNYV KVKMEGVGIA RKVNLGMHHS FHTLNQTLMD MFEKCDHDQQ QYELVYQDKE 180 GDWLLAQDIS WRSFIECAQR LKLLKRIFIH GQKVSYFFRP LWDNPPAPFT SIPHYYAENV 240 SMDHLCHLHG WSLRSQPRRI YDAIIFSNEL DLLEIRWHEL YPYVSKFVIL ESNTTFTGIP 300 KPLFFAINQE RFAFAKQKVV HDLYPGRVAV HGSNEDPFVL ESRQRGAMNT LLRRAGISNG 360 DILLMSDTDE IPSPHTLKLL QWCDGIPPIM HLELRNYMYS FEFPVDYSSW RATAHVYGPR 420 SNYRHSRQTD VIFSDAGWHC SFCFRYISEF VFKMTAYSHA DRVKRRSFLS HSRIQDLICK 480 GDDLFDMLPE EYSFQELIKK MGSIPRSASA VHLPAYLIEN ADKFKFLLPG GCLRKPE* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02309 | AUX_IAA | 6.0e-21 | 94 | 206 | 123 | + AUX/IAA family. Transcription of the AUX/IAA family of genes is rapidly induced by the plant hormone auxin. Some members of this family are longer and contain an N terminal DNA binding domain. The function of this region is uncertain. | ||
pfam04724 | Glyco_transf_17 | 0 | 207 | 536 | 331 | + Glycosyltransferase family 17. This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression. |
Gene Ontology | |
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GO Term | Description |
GO:0003830 | beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity |
GO:0005634 | nucleus |
GO:0006355 | regulation of transcription, DNA-dependent |
GO:0006487 | protein N-linked glycosylation |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU20311.1 | 0 | 242 | 537 | 1 | 296 | unknown [Glycine max] |
EMBL | CAN62998.1 | 0 | 212 | 537 | 38 | 363 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282327.1 | 0 | 212 | 537 | 38 | 363 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324640.1 | 0 | 212 | 537 | 38 | 363 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527177.1 | 0 | 212 | 537 | 38 | 363 | acetylglucosaminyltransferase, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO801289 | 311 | 228 | 538 | 0 |
FY460771 | 257 | 213 | 469 | 0 |
FE692835 | 259 | 280 | 538 | 0 |
DV456870 | 266 | 272 | 537 | 0 |
FE692836 | 241 | 207 | 447 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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