Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g124490.1 |
Family | CE8 |
Protein Properties | Length: 519 Molecular Weight: 56848.4 Isoelectric Point: 7.0625 |
Chromosome | Chromosome/Scaffold: 4 Start: 43428418 End: 43431266 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 206 | 501 | 0 |
AVVAADGSGDYAKVMDAVSAAPESSMKRYVIYVKKGVYVENVEIKKKKWNIMLIGEGMDATIISGSRNYVDGSTTFRSATFAVSGRGFIARDISFQNTAG AEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFYRECKISGTVDFIFGDATAVFQNCQILAKKGMPKQKNTVTAQGRKDPNQPTGFSFQFCNISA DSDLLPSVTTIPTYLGRPWKTYSRTIFMQSYMSDAIRPEGWLEWNGNFALNTLYYAEYMNSGPGAGVANRVKWSGYHVLNDSSEATKFTVAQFIEG |
Full Sequence |
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Protein Sequence Length: 519 Download |
MELCSSKQPS TTTLSITTFI FFFLLLLSLP HSTFASSPND FVGSSLRVST AKFANSAEEV 60 ITVLQKVISI LSRFTNVFGH SRTSNAVSDC LDLLDMSLDQ LNQSISAAQK PKEKDNSTGK 120 LNCDLRTWLS AVLVYPDTCI EGLEGSIVKG LISSGLDHVM SLVANLLGEV VSGNDDQLAT 180 NKDRFPSWIR DEDTKLLQAN GVTADAVVAA DGSGDYAKVM DAVSAAPESS MKRYVIYVKK 240 GVYVENVEIK KKKWNIMLIG EGMDATIISG SRNYVDGSTT FRSATFAVSG RGFIARDISF 300 QNTAGAEKHQ AVALRSDSDL SVFYRCGIFG YQDSLYTHTM RQFYRECKIS GTVDFIFGDA 360 TAVFQNCQIL AKKGMPKQKN TVTAQGRKDP NQPTGFSFQF CNISADSDLL PSVTTIPTYL 420 GRPWKTYSRT IFMQSYMSDA IRPEGWLEWN GNFALNTLYY AEYMNSGPGA GVANRVKWSG 480 YHVLNDSSEA TKFTVAQFIE GNLWLPSTGV TYTSGLKV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 2.0e-158 | 124 | 518 | 414 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 7.0e-162 | 124 | 517 | 407 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 6.0e-175 | 115 | 516 | 407 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 36 | 518 | 497 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 219 | 502 | 284 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92470.1 | 0 | 35 | 518 | 34 | 528 | unknown [Populus trichocarpa] |
DDBJ | BAF42041.1 | 0 | 39 | 516 | 30 | 507 | pectin methylesterase 4 [Pyrus communis] |
RefSeq | NP_189913.3 | 0 | 17 | 516 | 9 | 525 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q43062 | 0 | 39 | 518 | 42 | 522 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 35 | 518 | 26 | 520 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 202 | 516 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 198 | 516 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 2e-22 | 202 | 473 | 2 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-22 | 202 | 473 | 2 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 5e-22 | 202 | 473 | 2 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |