y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g124660.2 |
Family | GT4 |
Protein Properties | Length: 806 Molecular Weight: 92293.7 Isoelectric Point: 6.2032 |
Chromosome | Chromosome/Scaffold: 4 Start: 43554201 End: 43558060 |
Description | sucrose synthase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 565 | 731 | 0 |
LKDRNKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEIAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKG AFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKV |
Full Sequence |
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Protein Sequence Length: 806 Download |
MATERLTRVH SLKERLDETL TANRNEILAL LSRLEAKGKG ILQHHQVIAE FEEIPEDSRQ 60 KLTDGAFGEV LRSTQEAIVL PPWVALAVRP RPGIWEYLRV NVHALVVENL QPAEFLKFKE 120 ELVDGSANGN FVLELDFEPF TASFPRPTLN KSIGNGVQFL NRHLSAKLFH DKESLHPLLE 180 FLRLHSYKGK TLMLNDRIQN PDSLQHVLRK AEEYLSTIDP ETPYSEFEHR FQEIGLERGW 240 GDTAERVLES IQLLLDLLEA PDPCTLETFL DRIPMVFNVV ILSPHGYFAQ DDVLGYPDTG 300 GQVVYILDQV RALESEMLSR IKKQGLDIIP RILIITRLLP DAVGTTCGQR LEKVYGTEHC 360 HILRVPFRDT KGIVRKWISR FEVWPYLETY TEDVAHELAK ELQGKPDLIV GNYSDGNIVA 420 SLLAHKLGVT QCTIAHALEK TKYPESDIYW KKFEEKYHFS CQFTADLFAM NHTDFIITST 480 FQEIAGSKDK VGQYESHTAF TLPGLYRVVH GIDVFDPKFN IVSPGADQTI YFPYTETSRR 540 LTSFYPEIEE LLYSSVENEE HICVLKDRNK PIIFTMARLD RVKNITGLVE WYGKNAKLRE 600 LVNLVVVAGD RRKESKDLEE IAEMKKMYGL IETYKLNGQF RWISSQMNRV RNGELYRVIC 660 DTKGAFVQPA VYEAFGLTVV EAMATGLPTF ATLNGGPAEI IVHGKSGFHI DPYHGDRAAD 720 LLVEFFEKVK VDPSHWDKIS QGGLQRIEEK YTWTIYSQRL LTLTGVYGFW KHVSNLDRLE 780 SRRYLEMFYA LKYRKLAESV PLAVE* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 7.0e-60 | 279 | 763 | 493 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 8.0e-117 | 278 | 762 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 1 | 805 | 808 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 24 | 803 | 784 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 7 | 554 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABP88869.1 | 0 | 5 | 805 | 4 | 804 | sucrose synthase [Medicago sativa subsp. falcata] |
EMBL | CAB40794.1 | 0 | 1 | 805 | 1 | 805 | sucrose synthase [Medicago truncatula] |
EMBL | CAB40795.1 | 0 | 1 | 805 | 1 | 805 | sucrose synthase [Medicago truncatula] |
Swiss-Prot | O65026 | 0 | 1 | 805 | 1 | 805 | SUSY_MEDSA RecName: Full=Sucrose synthase; AltName: Full=Sucrose-UDP glucosyltransferase |
Swiss-Prot | P31926 | 0 | 1 | 805 | 1 | 805 | SUSY_VICFA RecName: Full=Sucrose synthase; AltName: Full=Sucrose-UDP glucosyltransferase |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 2 | 803 | 4 | 805 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3s29_G | 0 | 2 | 803 | 4 | 805 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3s29_F | 0 | 2 | 803 | 4 | 805 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3s29_E | 0 | 2 | 803 | 4 | 805 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3s29_D | 0 | 2 | 803 | 4 | 805 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 806 | 1 | 806 | 0 |
BU103683 | 801 | 6 | 805 | 0 |
CX109054 | 598 | 101 | 698 | 0 |
FG227316 | 453 | 276 | 728 | 0 |
GW837855 | 412 | 342 | 753 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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