| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr4g127370.1 |
| Family | GH95 |
| Protein Properties | Length: 856 Molecular Weight: 95105.7 Isoelectric Point: 5.6461 |
| Chromosome | Chromosome/Scaffold: 4 Start: 44250678 End: 44257200 |
| Description | 1,2-alpha-L-fucosidases |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH95 | 31 | 691 | 0 |
| SMPLKVTFSRSAKYWTDAIPIGNGRLGAMIWGGIQSEVLQLNEDTLWTGIPGNYTDKNAPEALAEVRKLVDDRKYSEATTAALKLLGPPGEVYQLLGDIE LQFDDSHLKYSEESYHRELDLDNATHFASNPDQVLVTKFSTSNSGSLSFTVSLDSKLHHNTRLSSKNQIIMEGSCPGKRIPPQVNSSDEPKGIQFSAVLD VQISNEKGVIHVLDDKKLRVEGSDWAILLLTASSSFDGPFTNPENSKKDLTSESLSKMKFVTSLKYDDIYARHLDDYQNLFHRVSLQLSKSSKTVLGKPI LDEGKMVSCQTNISQLRGGDIVPTSSRIKSFQNDEDPSFVELLFQYGRYLLIACSRPGTQVANLQGIWNKDVVPKWDGAPHLNINLQMNYWPSLSCNLHE CQEPLFDCISSLSVNGSKTAKVNYDANGWVAHHVSDLWAKTSTYRGPAVWALWPMGGAWLCTHLWEHYTYTTDKEFLKNKAYPLLEGCTSFLLDWLIEGP GGLLETNPSTSPEHMFIASDQKRASVSYSSTMDISIIKEVFSIVISAAEILGRQDDAIIKRVFESQSKLPPIKIARDGSIMEWAEDFQDPDVHHWHVSHL FGLFPGHTINIEKTPNLCKAVNYSLIKRGDEGPGWSTTWKAALWARLHNSEHAYRMIKHLV | |||
| Full Sequence |
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| Protein Sequence Length: 856 Download |
| MEDGEWIMVQ CPPQKDLWNP SLANADDDEP SMPLKVTFSR SAKYWTDAIP IGNGRLGAMI 60 WGGIQSEVLQ LNEDTLWTGI PGNYTDKNAP EALAEVRKLV DDRKYSEATT AALKLLGPPG 120 EVYQLLGDIE LQFDDSHLKY SEESYHRELD LDNATHFASN PDQVLVTKFS TSNSGSLSFT 180 VSLDSKLHHN TRLSSKNQII MEGSCPGKRI PPQVNSSDEP KGIQFSAVLD VQISNEKGVI 240 HVLDDKKLRV EGSDWAILLL TASSSFDGPF TNPENSKKDL TSESLSKMKF VTSLKYDDIY 300 ARHLDDYQNL FHRVSLQLSK SSKTVLGKPI LDEGKMVSCQ TNISQLRGGD IVPTSSRIKS 360 FQNDEDPSFV ELLFQYGRYL LIACSRPGTQ VANLQGIWNK DVVPKWDGAP HLNINLQMNY 420 WPSLSCNLHE CQEPLFDCIS SLSVNGSKTA KVNYDANGWV AHHVSDLWAK TSTYRGPAVW 480 ALWPMGGAWL CTHLWEHYTY TTDKEFLKNK AYPLLEGCTS FLLDWLIEGP GGLLETNPST 540 SPEHMFIASD QKRASVSYSS TMDISIIKEV FSIVISAAEI LGRQDDAIIK RVFESQSKLP 600 PIKIARDGSI MEWAEDFQDP DVHHWHVSHL FGLFPGHTIN IEKTPNLCKA VNYSLIKRGD 660 EGPGWSTTWK AALWARLHNS EHAYRMIKHL VVLADPEQEA VGFEGGLHSH GIECALGTVQ 720 GILFKEKHHL PYPEGLKDNA MPTLNLFTNI PVDPVIASDI LRDATKVVAK IIGKPESYVM 780 ILLNGGVPIA FGGTEEPAAY GELISIGGLG PSVNAKLSST IAQILQTKLY IDSSRFYIKF 840 YDSERSFFGF NGSTF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00450 | PTZ00450 | 1.0e-11 | 741 | 855 | 115 | + macrophage migration inhibitory factor-like protein; Provisional | ||
| PTZ00397 | PTZ00397 | 3.0e-20 | 741 | 855 | 115 | + macrophage migration inhibition factor-like protein; Provisional | ||
| pfam01187 | MIF | 5.0e-22 | 742 | 855 | 114 | + Macrophage migration inhibitory factor (MIF). | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002270199.1 | 0 | 1 | 710 | 1 | 725 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298754.1 | 0 | 26 | 710 | 4 | 687 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313154.1 | 0 | 26 | 708 | 5 | 680 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527475.1 | 0 | 1 | 710 | 1 | 716 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002527476.1 | 0 | 2 | 710 | 4 | 728 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2rdy_B | 0 | 32 | 710 | 1 | 670 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2rdy_A | 0 | 32 | 710 | 1 | 670 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2eae_A | 0 | 49 | 688 | 51 | 745 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
| PDB | 2eac_B | 0 | 49 | 688 | 52 | 746 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
| PDB | 2eac_A | 0 | 49 | 688 | 52 | 746 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX263860 | 300 | 395 | 694 | 0 |
| ES839492 | 300 | 361 | 659 | 0 |
| DV139377 | 274 | 413 | 686 | 0 |
| DY816076 | 290 | 404 | 693 | 0 |
| GT626952 | 274 | 277 | 550 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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