| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr4g128810.1 |
| Family | GH9 |
| Protein Properties | Length: 365 Molecular Weight: 40741.8 Isoelectric Point: 8.3951 |
| Chromosome | Chromosome/Scaffold: 4 Start: 45078529 End: 45081281 |
| Description | Six-hairpin glycosidases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH9 | 114 | 330 | 1.49939e-42 |
| KRYMWGSVWLFLATSNNTYLSLAMATDPSVPKNAKAFDKITDFNKLPAEILSMYHESTSLTMWGFIQLNHGYPNSLQYVVNASFMASLFADYMKAQGVPG WYCNHNYFSISVLKAFATSQMDYIMCKNPMNMSYIVGYGNKFPRHVHHRGASIPNDDKHYSCIEGWKWRDTPNRNPNNIVGAMVGGPNGFDQFYDLRNNN SYTEPTLAGNAGLVAAL | |||
| Full Sequence |
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| Protein Sequence Length: 365 Download |
| MQKVSLILHT TTKEGTKAGT LPKSNNISWR GKSGLQDGKD TNDKEGLVSV NRYDHARELI 60 KWGTDYLLLT FDSSASEINQ IHAKVGGSLK GSEKPEDMEY PPETVFAFAR DSSKRYMWGS 120 VWLFLATSNN TYLSLAMATD PSVPKNAKAF DKITDFNKLP AEILSMYHES TSLTMWGFIQ 180 LNHGYPNSLQ YVVNASFMAS LFADYMKAQG VPGWYCNHNY FSISVLKAFA TSQMDYIMCK 240 NPMNMSYIVG YGNKFPRHVH HRGASIPNDD KHYSCIEGWK WRDTPNRNPN NIVGAMVGGP 300 NGFDQFYDLR NNNSYTEPTL AGNAGLVAAL ISLTSTSTIG SGFDTDHTIF NQTRQYRPQN 360 LPPP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02345 | PLN02345 | 0.0001 | 17 | 98 | 118 | + endoglucanase | ||
| PLN02909 | PLN02909 | 1.0e-39 | 14 | 318 | 430 | + Endoglucanase | ||
| PLN02613 | PLN02613 | 4.0e-43 | 14 | 327 | 435 | + endoglucanase | ||
| PLN02345 | PLN02345 | 4.0e-51 | 117 | 327 | 252 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 6.0e-56 | 14 | 327 | 450 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT54547.1 | 0 | 17 | 340 | 135 | 602 | endo-1,4-beta-glucanase [Dimocarpus longan] |
| RefSeq | XP_002266444.1 | 0 | 17 | 351 | 126 | 601 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312211.1 | 0 | 17 | 340 | 127 | 594 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002315101.1 | 0 | 17 | 340 | 128 | 595 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514768.1 | 0 | 17 | 351 | 132 | 606 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ia7_A | 2e-16 | 118 | 330 | 215 | 423 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
| PDB | 1ia6_A | 2e-16 | 118 | 330 | 215 | 423 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
| PDB | 1kfg_B | 0.000000000006 | 118 | 333 | 216 | 436 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
| PDB | 1kfg_A | 0.000000000006 | 118 | 333 | 216 | 436 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
| PDB | 1k72_B | 0.000000000006 | 118 | 333 | 216 | 436 | A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO794674 | 459 | 17 | 327 | 0 |
| BF010444 | 457 | 17 | 327 | 0 |
| HO796213 | 454 | 23 | 327 | 0 |
| FF389981 | 252 | 115 | 327 | 0 |
| DV151706 | 240 | 115 | 315 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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