| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr4g129200.1 |
| Family | GH33 |
| Protein Properties | Length: 468 Molecular Weight: 52774.4 Isoelectric Point: 9.7374 |
| Chromosome | Chromosome/Scaffold: 4 Start: 45261344 End: 45264395 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH33 | 44 | 343 | 3.5e-31 |
| EEFTFPAKSSVPFNSCHASTIVEVGKGHFLVAYFGGTSEGAPDVKIWLQTYKNGIWQAPVIGDEEPNVPMWNPVLFKLPSNVLLLFYKIGQDFQKWSGFI KRSYDKGITWTEREQLPPGILGPIKNKPILLENGDLLCGSSVESWNSWGSWAEVTTDFGKTWRKYGPIYIKNNPLGVIQPVPYQTAKGTLRVLLRSFTGI GRVYMSESFDGGKTWGYAEPTQLHNPNSGIDGIKLKDGRLLIAYNTISRGVLKLALSEDDGDSWHQALTLEDTVGMEFSYPAVIQASDGRVHVTYTYNRT | |||
| Full Sequence |
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| Protein Sequence Length: 468 Download |
| MSLFLSFLHI VFLISSIIHT AYSFSGLNST EAHGKGYIQG LVVEEFTFPA KSSVPFNSCH 60 ASTIVEVGKG HFLVAYFGGT SEGAPDVKIW LQTYKNGIWQ APVIGDEEPN VPMWNPVLFK 120 LPSNVLLLFY KIGQDFQKWS GFIKRSYDKG ITWTEREQLP PGILGPIKNK PILLENGDLL 180 CGSSVESWNS WGSWAEVTTD FGKTWRKYGP IYIKNNPLGV IQPVPYQTAK GTLRVLLRSF 240 TGIGRVYMSE SFDGGKTWGY AEPTQLHNPN SGIDGIKLKD GRLLIAYNTI SRGVLKLALS 300 EDDGDSWHQA LTLEDTVGME FSYPAVIQAS DGRVHVTYTY NRTQIKAKVM QTNLFFQTEK 360 HRKLYNLCMQ FIWPFFVNEK GASPDKKKNE KLEAYRKGYK TTISQQGLRH NARNNSRRPQ 420 IKFCKSICNL VSLAKNMLHL ITRQISNAIG DFEKPRSNDD FFHTPSK* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 5.0e-5 | 99 | 308 | 247 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 1.0e-26 | 28 | 346 | 373 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 5.0e-98 | 70 | 336 | 282 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU18568.1 | 0 | 1 | 351 | 1 | 352 | unknown [Glycine max] |
| RefSeq | NP_001078763.1 | 0 | 41 | 362 | 19 | 339 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | XP_002263578.1 | 0 | 37 | 353 | 54 | 369 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324495.1 | 0 | 41 | 351 | 10 | 319 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531744.1 | 0 | 37 | 353 | 6 | 321 | conserved hypothetical protein [Ricinus communis] |
