Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g010350.1 |
Family | GT47 |
Protein Properties | Length: 524 Molecular Weight: 60668.9 Isoelectric Point: 6.6918 |
Chromosome | Chromosome/Scaffold: 5 Start: 2516855 End: 2518426 |
Description | root hair specific 8 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 140 | 466 | 0 |
GIYVYDLPSRFNKDLIGQCNEMFPWQDFCRYTSNEGFGEPRSKLGKGWYNTHQYSLEQIFHSRVLKHPCRVYNENDAKLFYVPFYGGLDVLRWHFKNVSN DVKDSLGLELVKWLEKQVTWKRNLGKDHVFVLGKISWDFRRTSDSPWGTRLLKLDEFQNPIKLLIERQPWHLNDIGVPHPTFFHPKSDNDIIDWQLKIIR SNRKNLVSFAGAARDDADDHIRSILINQCSSKSEGKCKFLNCSSVKCSEPESIMELFVESEFCLQPPGDSPTRKSVFDSLISGCIPVLFDPFTAYYQYAW HLPEDSDKYSVFLDKKEVREMNVSVME |
Full Sequence |
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Protein Sequence Length: 524 Download |
MVMSLSFLGR ISALIFLLFL IYMWSSLSTI ITVNTIHVCC STRKFSNSFY CLSSPTHTNT 60 SFEISNYSIN NNTISTSIIT TIENIDDGNN ASQELGTFPI TTPYDEEVAY AVKIIEEQLK 120 VQRSWRSENK NNATCDDGQG IYVYDLPSRF NKDLIGQCNE MFPWQDFCRY TSNEGFGEPR 180 SKLGKGWYNT HQYSLEQIFH SRVLKHPCRV YNENDAKLFY VPFYGGLDVL RWHFKNVSND 240 VKDSLGLELV KWLEKQVTWK RNLGKDHVFV LGKISWDFRR TSDSPWGTRL LKLDEFQNPI 300 KLLIERQPWH LNDIGVPHPT FFHPKSDNDI IDWQLKIIRS NRKNLVSFAG AARDDADDHI 360 RSILINQCSS KSEGKCKFLN CSSVKCSEPE SIMELFVESE FCLQPPGDSP TRKSVFDSLI 420 SGCIPVLFDP FTAYYQYAWH LPEDSDKYSV FLDKKEVREM NVSVMERLGN ISLRDRENMR 480 RYIVYELLPG LVYGDHNAEF DKFQDAFAIT MNNLIKRVSR FKD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-63 | 141 | 468 | 343 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34680.1 | 0 | 34 | 521 | 513 | 992 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_176534.2 | 0 | 105 | 520 | 248 | 662 | catalytic [Arabidopsis thaliana] |
RefSeq | XP_002269913.1 | 0 | 34 | 521 | 58 | 537 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299537.1 | 0 | 36 | 522 | 60 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509789.1 | 0 | 34 | 522 | 58 | 567 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |