y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g011010.1 |
Family | AA3 |
Protein Properties | Length: 581 Molecular Weight: 63599.4 Isoelectric Point: 8.3501 |
Chromosome | Chromosome/Scaffold: 5 Start: 2837047 End: 2842725 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 41 | 573 | 0 |
SAPIISYYDYIIVGGGTAGCPLAATLSQNHRVLVLERGGSPYGNPNITNLSAYGVPLSDTSPSSPAQRFISEDGVINSRARVLGGGSCLNAGFYTRASPR YVREAGWDGKLVNESYKWVERVVAFRPSMRQWQSAVRDGLLEVGVLPYNGFTYDHIHGTKVGGTIFDHNGHRHTAADLLEYANTNTITLLLHATVHRILF TTHKERSNSRPVAHGVLYKDARGTEHRAYLNHGTKNEIIVSAGALGSPQLLMLSGIGAGHHLREHNISVVLDQPLVGQGMSDNPMNAVYVPSPSPVEVSL ISVVGITNFGSYIEAVSGAAFTSNGSEFTMFTPKIGQFSKLPPKQMILQAIAKAIGRIESLDQEALRGGFILEKVIGPISTGHLELRNTDPNDNPLVTFN YFQDPRDLERCIQGMGTIEKIIDSNAFAPFRYNNISFSMLLNMIANAQVNLLPKHTNTSMSLEQFCRDTVMTIWHYHGGCQVGRVVDNDYKVLGVDALRV IDGSTFNYSPGTNPQATLMMLGRYMGVRILRER |
Full Sequence |
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Protein Sequence Length: 581 Download |
MGALLWKLNL LFLAGILFSL KHCASHRDTG RKYSFMQDAT SAPIISYYDY IIVGGGTAGC 60 PLAATLSQNH RVLVLERGGS PYGNPNITNL SAYGVPLSDT SPSSPAQRFI SEDGVINSRA 120 RVLGGGSCLN AGFYTRASPR YVREAGWDGK LVNESYKWVE RVVAFRPSMR QWQSAVRDGL 180 LEVGVLPYNG FTYDHIHGTK VGGTIFDHNG HRHTAADLLE YANTNTITLL LHATVHRILF 240 TTHKERSNSR PVAHGVLYKD ARGTEHRAYL NHGTKNEIIV SAGALGSPQL LMLSGIGAGH 300 HLREHNISVV LDQPLVGQGM SDNPMNAVYV PSPSPVEVSL ISVVGITNFG SYIEAVSGAA 360 FTSNGSEFTM FTPKIGQFSK LPPKQMILQA IAKAIGRIES LDQEALRGGF ILEKVIGPIS 420 TGHLELRNTD PNDNPLVTFN YFQDPRDLER CIQGMGTIEK IIDSNAFAPF RYNNISFSML 480 LNMIANAQVN LLPKHTNTSM SLEQFCRDTV MTIWHYHGGC QVGRVVDNDY KVLGVDALRV 540 IDGSTFNYSP GTNPQATLMM LGRYMGVRIL RERLAADETN * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03970 | Rv0697 | 1.0e-6 | 418 | 562 | 146 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
pfam05199 | GMC_oxred_C | 3.0e-24 | 418 | 562 | 150 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
TIGR03970 | Rv0697 | 3.0e-25 | 49 | 324 | 311 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
COG2303 | BetA | 4.0e-43 | 48 | 576 | 576 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 0 | 16 | 574 | 572 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34759.1 | 0 | 23 | 577 | 24 | 575 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001053612.1 | 0 | 10 | 574 | 11 | 581 | Os04g0573100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002282510.1 | 0 | 36 | 577 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298074.1 | 0 | 15 | 578 | 15 | 574 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509694.1 | 0 | 5 | 580 | 8 | 548 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ju2_B | 0 | 34 | 577 | 13 | 521 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1ju2_A | 0 | 34 | 577 | 13 | 521 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdp_B | 0 | 34 | 577 | 13 | 521 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdp_A | 0 | 34 | 577 | 13 | 521 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdn_B | 0 | 34 | 577 | 13 | 521 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |