| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g013640.1 |
| Family | GH14 |
| Protein Properties | Length: 544 Molecular Weight: 60680.1 Isoelectric Point: 7.8306 |
| Chromosome | Chromosome/Scaffold: 5 Start: 4113637 End: 4116154 |
| Description | chloroplast beta-amylase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 90 | 498 | 0 |
| FVMLPLDTVTMGGKLNKARAMNASLMALKSAGVEGVMVDAWWGLVEKDGPMKYNWEAYAELVQMVQKHGLKLQIVMSFHQCGGNVGDSCSIPLPPWVLEE IRKNPELVYTDKLGRRNPEYISLGCDSVPVLAGRTPLQVYSDYMRSFRDRFTDYLGNVIIEIQVGLGPCGELRYPSYPETDGTWKFPGIGEFQCYDKYMR SSLEASAAAIGKKEWGTGGPHDSGQYNQFPEDTGFFKREGTWNTEYGDFFLDWYSSKLVEHGEKILVSAKSIFQTSGVKLSAKIAGIHWHYNARSHATEL TAGYYNTRFHDGYIPIAQMLAKHGVILNFTCMEMKDNEQPGHANCSPEGLVNQVKMATKIAGGELAGENALERYDSSAYGQVLSTSGLSAFTYLRINKRL LEGENWRQF | |||
| Full Sequence |
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| Protein Sequence Length: 544 Download |
| MALTLRSSIS FIHKKETRVL KSLDDFSSNK VSCPKFKPLF HLKAKSSMQE THFTKENTNS 60 AVKENKKREK VLAPSIAHNH DADSTRVPVF VMLPLDTVTM GGKLNKARAM NASLMALKSA 120 GVEGVMVDAW WGLVEKDGPM KYNWEAYAEL VQMVQKHGLK LQIVMSFHQC GGNVGDSCSI 180 PLPPWVLEEI RKNPELVYTD KLGRRNPEYI SLGCDSVPVL AGRTPLQVYS DYMRSFRDRF 240 TDYLGNVIIE IQVGLGPCGE LRYPSYPETD GTWKFPGIGE FQCYDKYMRS SLEASAAAIG 300 KKEWGTGGPH DSGQYNQFPE DTGFFKREGT WNTEYGDFFL DWYSSKLVEH GEKILVSAKS 360 IFQTSGVKLS AKIAGIHWHY NARSHATELT AGYYNTRFHD GYIPIAQMLA KHGVILNFTC 420 MEMKDNEQPG HANCSPEGLV NQVKMATKIA GGELAGENAL ERYDSSAYGQ VLSTSGLSAF 480 TYLRINKRLL EGENWRQFVD FVVSMSDGGK PRLSKSDSYG TDLYVGHIKG IKESEVIIEI 540 ALV* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 7.0e-144 | 65 | 505 | 454 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 1.0e-170 | 90 | 501 | 426 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02803 | PLN02803 | 0 | 1 | 543 | 551 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 87 | 511 | 437 | + beta-amylase; Provisional | ||
| PLN02801 | PLN02801 | 0 | 87 | 505 | 433 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI39244.1 | 0 | 1 | 543 | 1 | 540 | beta-amylase [Glycine max] |
| EMBL | CAN62440.1 | 0 | 1 | 543 | 1 | 543 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002282871.1 | 0 | 1 | 543 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326690.1 | 0 | 1 | 529 | 1 | 534 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329547.1 | 0 | 1 | 543 | 1 | 548 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ukp_D | 0 | 87 | 505 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 87 | 505 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_B | 0 | 87 | 505 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_A | 0 | 87 | 505 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1wdp_A | 0 | 87 | 505 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794833 | 421 | 125 | 538 | 0 |
| HO781538 | 405 | 31 | 434 | 0 |
| BU103692 | 542 | 1 | 535 | 0 |
| HO825836 | 388 | 161 | 541 | 0 |
| DV161367 | 302 | 121 | 422 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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