| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g018270.1 |
| Family | AA1 |
| Protein Properties | Length: 539 Molecular Weight: 59977.8 Isoelectric Point: 9.3004 |
| Chromosome | Chromosome/Scaffold: 5 Start: 6538701 End: 6543083 |
| Description | SKU5 similar 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 49 | 496 | 0 |
| QQVILINGQFPGPRLDLITNNNVILNLVNKLDEPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGTYSYFPSTKMHKAAGGFGGLNVY RRSVIPIPYPNPDGDFTLLIGDWYKASHKVLRQSLDLGKSPGFPDGLLINGQVHSTFTGNQGKTYMFRISNVGLSTSINFRIQGHTLKLVEVEGSHTLQN VYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTQTVLSTTSVLHYSNSRSSASGPLPAPPADNYDWSMKQARTYRWNLTANAARPNPQGSFHYGKIIP TKRIYLANSAPLINGKLRYAVNSVSYINPDTPLKLADYFNIPGILGDIQTTPSNGPAHIATSVLRTSLHDFIEVVFQNNENTMQSWHLDGYDFWVVGYGS GQWTDASRSTYNLVDALTRHTAQVYPNSWTAILVSLDNQGMWNLRSAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 539 Download |
| MGSRSTSVLS LLCLVLALVS VSLVQAEDDY KFYTWTVTYG ILSPLGTPQQ VILINGQFPG 60 PRLDLITNNN VILNLVNKLD EPFLLTWNGI KQRKNSWQDG VLGTNCPIPP NSNYTYKFQT 120 KDQIGTYSYF PSTKMHKAAG GFGGLNVYRR SVIPIPYPNP DGDFTLLIGD WYKASHKVLR 180 QSLDLGKSPG FPDGLLINGQ VHSTFTGNQG KTYMFRISNV GLSTSINFRI QGHTLKLVEV 240 EGSHTLQNVY DSLDVHVGQS VSVLVTLNQP PKDYYIVAST RFTQTVLSTT SVLHYSNSRS 300 SASGPLPAPP ADNYDWSMKQ ARTYRWNLTA NAARPNPQGS FHYGKIIPTK RIYLANSAPL 360 INGKLRYAVN SVSYINPDTP LKLADYFNIP GILGDIQTTP SNGPAHIATS VLRTSLHDFI 420 EVVFQNNENT MQSWHLDGYD FWVVGYGSGQ WTDASRSTYN LVDALTRHTA QVYPNSWTAI 480 LVSLDNQGMW NLRSAIWERQ YLGQQLYLRV WNAQRTAANE YDIPNNALLC GKALGHHP* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02835 | PLN02835 | 0 | 25 | 538 | 516 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 25 | 535 | 524 | + copper ion binding / oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 25 | 537 | 520 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 26 | 537 | 515 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 27 | 534 | 531 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN72538.1 | 0 | 11 | 538 | 46 | 592 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI18560.1 | 0 | 11 | 538 | 6 | 535 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002270831.1 | 0 | 11 | 538 | 7 | 536 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310162.1 | 0 | 8 | 537 | 6 | 537 | multicopper oxidase [Populus trichocarpa] |
| RefSeq | XP_002522337.1 | 0 | 26 | 537 | 25 | 538 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 31 | 531 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asq_A | 0 | 31 | 531 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_B | 0 | 31 | 531 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_A | 0 | 31 | 531 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1aso_B | 0 | 31 | 531 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
