| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g019620.1 |
| Family | AA6 |
| Protein Properties | Length: 253 Molecular Weight: 26813.7 Isoelectric Point: 6.2799 |
| Chromosome | Chromosome/Scaffold: 5 Start: 7171606 End: 7174826 |
| Description | Quinone reductase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA6 | 53 | 247 | 0 |
| KIFIVYYSMYGHVESLAKRIKQGVDAIEGVVGVLYRVPETLSNEVLNMMKAPVKDETIPVISPEMLIEADGVLFGFPTRYGSMAAQMKAFFDSTGSLWQG QKLAGKPAGLFVSTGTQGGGQETTAWTAITQLAHQGMLFVPIGYTFGPGMFIVDSIRGGSPYGAGVFAGDGSREASETELALAEHQGKYMAGIVK | |||
| Full Sequence |
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| Protein Sequence Length: 253 Download |
| MGKGGGCVPS KKKIPPVTET EQSPPRTTAT ESNDSDSIQE TQLPLQPTVA NLKIFIVYYS 60 MYGHVESLAK RIKQGVDAIE GVVGVLYRVP ETLSNEVLNM MKAPVKDETI PVISPEMLIE 120 ADGVLFGFPT RYGSMAAQMK AFFDSTGSLW QGQKLAGKPA GLFVSTGTQG GGQETTAWTA 180 ITQLAHQGML FVPIGYTFGP GMFIVDSIRG GSPYGAGVFA GDGSREASET ELALAEHQGK 240 YMAGIVKRLA KS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03358 | FMN_red | 2.0e-10 | 116 | 196 | 81 | + NADPH-dependent FMN reductase. | ||
| pfam00258 | Flavodoxin_1 | 8.0e-12 | 56 | 165 | 120 | + Flavodoxin. | ||
| COG0655 | WrbA | 5.0e-34 | 52 | 249 | 205 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 9.0e-56 | 53 | 249 | 198 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 9.0e-66 | 53 | 250 | 199 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| GO:0050662 | coenzyme binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACJ85377.1 | 0 | 1 | 252 | 1 | 212 | unknown [Medicago truncatula] |
| RefSeq | XP_002273030.1 | 0 | 1 | 252 | 1 | 256 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310794.1 | 0 | 1 | 252 | 1 | 254 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002327699.1 | 0 | 1 | 252 | 1 | 253 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525103.1 | 0 | 1 | 252 | 1 | 257 | Minor allergen Alt a, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dy4_C | 0 | 53 | 249 | 2 | 195 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 4dy4_A | 0 | 53 | 249 | 2 | 195 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_B | 0 | 53 | 249 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_A | 0 | 53 | 249 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6k_B | 0 | 53 | 249 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT138821 | 206 | 1 | 206 | 0 |
| EV262850 | 253 | 1 | 253 | 0 |
| FY466520 | 239 | 1 | 237 | 0 |
| JG584508 | 264 | 1 | 249 | 0 |
| FS328816 | 252 | 1 | 249 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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