Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g020890.1 |
Family | GH5 |
Protein Properties | Length: 439 Molecular Weight: 49857.1 Isoelectric Point: 9.5761 |
Chromosome | Chromosome/Scaffold: 5 Start: 7753296 End: 7756457 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 42 | 365 | 4.6e-34 |
NGNPYYANGFNAYWLMYTASDPSQRFKVSNAFREATSHGLTVARTWAFSDGGYSPLQYSPGFYNEQMFKGLDFVISEARKHGIKLILSLVNNYESFGGKK QYVNWARSNNGQYLTSDDDFFRNPVVKGFYINHVKTVLNRYNSFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQGWITEMASLVKSIDRNHLLEAGLE GFYGQSTPQRTKFNPTINNIGTDFIANNRIPGIDFATVHCYPDQWVQSSNEQDQLSFLNNWLSAHFLDAQYALKKPILVAEFGKSFKDSGFSSNQRDQLF NTVYYKIYASAKRGGPASGALFWQ |
Full Sequence |
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Protein Sequence Length: 439 Download |
MMKHFAWLFL LAILVHQECF NINVEAAGDG FVRTRGIHFM LNGNPYYANG FNAYWLMYTA 60 SDPSQRFKVS NAFREATSHG LTVARTWAFS DGGYSPLQYS PGFYNEQMFK GLDFVISEAR 120 KHGIKLILSL VNNYESFGGK KQYVNWARSN NGQYLTSDDD FFRNPVVKGF YINHVKTVLN 180 RYNSFTGIHY KDDPTIMAWE LMNEPRCTSD PSGRTIQGWI TEMASLVKSI DRNHLLEAGL 240 EGFYGQSTPQ RTKFNPTINN IGTDFIANNR IPGIDFATVH CYPDQWVQSS NEQDQLSFLN 300 NWLSAHFLDA QYALKKPILV AEFGKSFKDS GFSSNQRDQL FNTVYYKIYA SAKRGGPASG 360 ALFWQLLTEG MESFDDGYGI LLGQSTSTAN VIAQQSHKLY LIRKIYAKIA NERRWKRARF 420 NGRRSSRDGG NRGGQIGF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3934 | COG3934 | 3.0e-24 | 39 | 415 | 379 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32548.1 | 0 | 2 | 437 | 1 | 432 | endo-1,4-beta-mannosidase protein 2 [Prunus persica] |
GenBank | ABY58035.1 | 0 | 2 | 437 | 1 | 432 | mannase [Prunus salicina] |
GenBank | ACN78662.1 | 0 | 2 | 411 | 1 | 407 | endo-beta-mannanase [Actinidia arguta] |
GenBank | ACU18982.1 | 0 | 2 | 419 | 1 | 413 | unknown [Glycine max] |
RefSeq | XP_002327685.1 | 0 | 15 | 437 | 14 | 434 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 27 | 399 | 2 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 35 | 409 | 17 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 35 | 409 | 17 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 35 | 409 | 17 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 35 | 409 | 17 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |