Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g021190.1 |
Family | GH35 |
Protein Properties | Length: 844 Molecular Weight: 93904.4 Isoelectric Point: 7.2774 |
Chromosome | Chromosome/Scaffold: 5 Start: 7880571 End: 7885693 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 34 | 336 | 0 |
IINGQRRILFSGSIHYPRSTPDMWEDLIYKAKEGGLDVIETYVFWNVHEPSPGNYNFEGRNDLVRFIQTVHKAGLYAHLRIGPYVCAEWNFGGFPVWLKY VPGISFRQDNEPFKKAMQGFTEKIVGMMKSERLYESQGGPIILSQIENEYGAQSKMLGPVGYNYMSWAAKMAVEMGTGVPWIMCKEDDAPDPVINTCNGF YCDKFTPNKPYKPTMWTEAWSGWFSEFGGPIHKRPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLIRQPKYGHLKE LHK |
Full Sequence |
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Protein Sequence Length: 844 Download |
METTSVSKFL FLFVSLTLFL AVYSDVTYDR KAIIINGQRR ILFSGSIHYP RSTPDMWEDL 60 IYKAKEGGLD VIETYVFWNV HEPSPGNYNF EGRNDLVRFI QTVHKAGLYA HLRIGPYVCA 120 EWNFGGFPVW LKYVPGISFR QDNEPFKKAM QGFTEKIVGM MKSERLYESQ GGPIILSQIE 180 NEYGAQSKML GPVGYNYMSW AAKMAVEMGT GVPWIMCKED DAPDPVINTC NGFYCDKFTP 240 NKPYKPTMWT EAWSGWFSEF GGPIHKRPVQ DLAFAVARFI QKGGSFVNYY MYHGGTNFGR 300 TAGGPFITTS YDYDAPLDEY GLIRQPKYGH LKELHKAIKM CEKALISTDP VVTSLGNFQQ 360 AYVYTTESGD CSAFLSNYDS KSSARVMFNN MHYNLPPWSV SILPDCRNAV FNTAKVGVQT 420 SQMQMLPTNS ERFSWESFEE DTSSSSATTI TASGLLEQIN VTRDTSDYLW YITSVDVGSS 480 ESFLHGGKLP SLIVQSTGHA VHVFINGRLS GSAYGTREDR RFRYTGDVNL RAGTNTIALL 540 SVAVGLPNVG GHFETWNTGI LGPVVIHGLD KGKLDLSWQK WTYQVGLKGE AMNLASPDGI 600 SSVEWMQSAV VVQRNQPLTW HKTFFDAPEG EEPLALDMDG MGKGQIWING ISIGRYWTAI 660 ATGSCNDCNY AGSFRPPKCQ LGCGQPTQRW YHVPRSWLKQ NHNLLVVFEE LGGDPSKISL 720 AKRSVSSVCA DVSEYHPNLK NWHIDSYGKS ENFRPPKVHL HCNPGQAISS IKFASFGTPL 780 GTCGSYEQGA CHSSSSYDIL EQKCIGKPRC IVTVSNSNFG RDPCPNVLKR LSVEAVCAPT 840 IAN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-7 | 48 | 186 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 6.0e-23 | 26 | 328 | 365 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 1.0e-24 | 760 | 837 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 3.0e-165 | 32 | 338 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 22 | 838 | 819 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAW47739.1 | 0 | 1 | 842 | 1 | 844 | beta-galactosidase [Prunus persica] |
DDBJ | BAD91082.1 | 0 | 1 | 839 | 1 | 842 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAB16852.1 | 0 | 5 | 839 | 6 | 844 | beta-galactosidase like protein [Arabidopsis thaliana] |
RefSeq | XP_002274449.1 | 0 | 1 | 839 | 1 | 842 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310279.1 | 0 | 1 | 840 | 1 | 843 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 30 | 334 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9.99967e-42 | 25 | 350 | 10 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9.99967e-42 | 25 | 350 | 10 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |