| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g024080.1 |
| Family | GH35 |
| Protein Properties | Length: 807 Molecular Weight: 90327.3 Isoelectric Point: 7.1947 |
| Chromosome | Chromosome/Scaffold: 5 Start: 9385294 End: 9387714 |
| Description | beta-galactosidase 7 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 17 | 320 | 0 |
| LIINGERRLIFSGAIHYPRSTVEMWPDLIQKAKDGGLDAIETYIFWDRHEPVRREYNFSGNLDFVKFFQLIQKAGLYAIMRIGPYACAEWNFGGFPSWLH NMPGIELRTNNSVYKNEMQNFTTEIVNVVKEAKLFASQGGPIILAQIENEYGDIMWNYKDAGKAYVQWAAQMALAQNIGVPWIMCQQQDAPQPIINTCNG YYCHNFQPNNPKSPKIFTENWIGWFQKWGERVPHRSAEDSAFSVARFFQNGGVLNNYYMYHGGTNFGRTAGGPYITTSYDYDAPIDEYGNLNQPKWGHLK NLHA | |||
| Full Sequence |
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| Protein Sequence Length: 807 Download |
| MLYSCFATEV TYDSNALIIN GERRLIFSGA IHYPRSTVEM WPDLIQKAKD GGLDAIETYI 60 FWDRHEPVRR EYNFSGNLDF VKFFQLIQKA GLYAIMRIGP YACAEWNFGG FPSWLHNMPG 120 IELRTNNSVY KNEMQNFTTE IVNVVKEAKL FASQGGPIIL AQIENEYGDI MWNYKDAGKA 180 YVQWAAQMAL AQNIGVPWIM CQQQDAPQPI INTCNGYYCH NFQPNNPKSP KIFTENWIGW 240 FQKWGERVPH RSAEDSAFSV ARFFQNGGVL NNYYMYHGGT NFGRTAGGPY ITTSYDYDAP 300 IDEYGNLNQP KWGHLKNLHA AIKLGENVLT NYSARKDEDL GNGLTLTTYT NSSGARFCFL 360 SNNNNTDLGA RVDLKNDGVY IVPAWSVSII NGCNQEVFNT AKVNSQTSMM VKKSDNVSST 420 NLTWEWKVEP KRDTIHGNGS LKAQKLLEQK ELTLDASDYL WYMTSADIND TSIWSNATLR 480 VNTSGHSLHG YVNQRYVGYQ FSQYGNQFTY EKQVSLKNGT NIITLLSATV GLANYGAWFD 540 DKKTGISGGP VELIGKNNVT MDLSTNLWSY KIGLNGERRH LYDAQQNVSV AWHTNSSYIP 600 IGKPLIWYRA KFKSPFGTNP IVVDLQGLGK GHAWVNGHSI GRYWSSWISP SDGCSDTCDY 660 RGNYVPVKCN TNCGSPSQRW YHVPRSFLNH DMNTLVLFEE IGGNPQSVQF QTVTTGTICA 720 NVYEGAQFEL SCQSGQVMSQ IQFASYGNPE GQCGSFKKGN FDAANSQSVV EASCVGKNNC 780 GFNVTKEMFG VTNVSSIPRL AVQVTC* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam02449 | Glyco_hydro_42 | 1.0e-6 | 32 | 168 | 156 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| pfam02140 | Gal_Lectin | 8.0e-13 | 730 | 806 | 80 | + Galactose binding lectin domain. |
| COG1874 | LacA | 2.0e-22 | 10 | 312 | 349 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
| pfam01301 | Glyco_hydro_35 | 1.0e-154 | 16 | 322 | 322 | + Glycosyl hydrolases family 35. |
| PLN03059 | PLN03059 | 0 | 10 | 806 | 822 | + beta-galactosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27773.1 | 0 | 7 | 806 | 37 | 835 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002297749.1 | 0 | 7 | 806 | 22 | 823 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002324727.1 | 0 | 40 | 771 | 1 | 743 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326135.1 | 0 | 10 | 806 | 30 | 823 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516237.1 | 0 | 7 | 806 | 22 | 825 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0 | 14 | 318 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 3e-39 | 9 | 318 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 3e-39 | 9 | 318 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO778160 | 713 | 10 | 717 | 0 |
| HO780602 | 660 | 60 | 710 | 0 |
| DW076707 | 311 | 9 | 319 | 0 |
| DY280097 | 264 | 7 | 270 | 0 |
| DY280097 | 37 | 270 | 306 | 0.00001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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