| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g025650.1 |
| Family | AA3 |
| Protein Properties | Length: 854 Molecular Weight: 94164.1 Isoelectric Point: 7.4858 |
| Chromosome | Chromosome/Scaffold: 5 Start: 10192215 End: 10200868 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 332 | 848 | 0 |
| SLVVQCDAVVVGSGSGGGVVAGILANAGYKVLVLEKGGYSARNNLSLLEGPTMDQMYQAGGLVATDDMNIFILSGSTVGGGSAINWSACIKTPQHVCKEW CEKHGLELFESELYQEAMEAVCEKMGVQSEIEEEGFNNAILRKGCQEMGYPVNNIPRNASPDHYCGWCCLGCKDGKKKGTSETWLVDLVKSGNGAILPGC TAMKVLHKKKKGSGEKTARGVAFEFEYRGSKDICVVESKVTIVACGTLNTPSLLKRSGLKNNNIGRNLHLHPVVMAWGYFPDTPVEPTGASEVWPETWKK SYEGGIMTAMSPVVAEFEKSGYGAVIQTPALHPGTFSIVMPWVSGSDIKDRMRKFSRTAHIFALARDQGSGNVHSPSRISYEMEDVDEENLQKGIDKVLR ILAAAGAEEIGTHHNKGNTLNVKNASYHEFEQFVKKESSRSLTDLSTPLCSAHQMGSCRMGSNPKESVVKETGETWEVEDLFVADASVFPTALGMNPMIT VQSIAYCTAQSVLQVLK | |||
| Full Sequence |
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| Protein Sequence Length: 854 Download |
| MDMEMEMEME MENSNRGNQI KSGSFRKGSF RKGSFRLGGK DHTVVELGSI DTQKLLLEGG 60 GGEIREKQKT LKNSLSIKQM KSLTALCDTI LPSINDFVPV SDDDESAATF YRISASMAGT 120 PERLGGIISE RLIHPMTMVL KLVLWFLSTW LGTIILCGMG CLSTKFPFIH TFPDLPLHKR 180 QQIMQSWSLS FFRHLRMFFR TIKLLTLLIF FTQYKILFLL GNDLLYSSLH YTYFQVDESE 240 DNCSWKAIGY CGPDPEFKAQ LKNHFLHGAC KEKQDSEEGD NDAELAIGPL YKGLVHLNYP 300 RDIIVDTLRR FGFPVSVSRR KQKTAPSLSS PSLVVQCDAV VVGSGSGGGV VAGILANAGY 360 KVLVLEKGGY SARNNLSLLE GPTMDQMYQA GGLVATDDMN IFILSGSTVG GGSAINWSAC 420 IKTPQHVCKE WCEKHGLELF ESELYQEAME AVCEKMGVQS EIEEEGFNNA ILRKGCQEMG 480 YPVNNIPRNA SPDHYCGWCC LGCKDGKKKG TSETWLVDLV KSGNGAILPG CTAMKVLHKK 540 KKGSGEKTAR GVAFEFEYRG SKDICVVESK VTIVACGTLN TPSLLKRSGL KNNNIGRNLH 600 LHPVVMAWGY FPDTPVEPTG ASEVWPETWK KSYEGGIMTA MSPVVAEFEK SGYGAVIQTP 660 ALHPGTFSIV MPWVSGSDIK DRMRKFSRTA HIFALARDQG SGNVHSPSRI SYEMEDVDEE 720 NLQKGIDKVL RILAAAGAEE IGTHHNKGNT LNVKNASYHE FEQFVKKESS RSLTDLSTPL 780 CSAHQMGSCR MGSNPKESVV KETGETWEVE DLFVADASVF PTALGMNPMI TVQSIAYCTA 840 QSVLQVLKRK RTK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 0.0003 | 784 | 822 | 39 | + choline dehydrogenase; Validated | ||
| TIGR02462 | pyranose_ox | 4.0e-5 | 772 | 848 | 77 | + pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation. | ||
| pfam05199 | GMC_oxred_C | 6.0e-21 | 709 | 837 | 129 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 6.0e-33 | 355 | 837 | 549 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 3.0e-61 | 384 | 604 | 226 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29206.1 | 0 | 40 | 847 | 6 | 644 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_193673.2 | 0 | 80 | 851 | 1 | 726 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269629.1 | 0 | 40 | 851 | 6 | 787 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328753.1 | 0 | 80 | 852 | 1 | 746 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519938.1 | 0 | 123 | 852 | 7 | 710 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1kdg_B | 0.000001 | 338 | 846 | 9 | 542 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1kdg_A | 0.000001 | 338 | 846 | 9 | 542 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1naa_B | 0.000001 | 338 | 846 | 4 | 537 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 1naa_A | 0.000001 | 338 | 846 | 4 | 537 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 3t37_A | 0.00001 | 315 | 822 | 5 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
