Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g025830.1 |
Family | GH35 |
Protein Properties | Length: 829 Molecular Weight: 92740.6 Isoelectric Point: 8.1755 |
Chromosome | Chromosome/Scaffold: 5 Start: 10287195 End: 10289681 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 32 | 335 | 0 |
LIINGERRLIFSGAIHYPRSTVDMWPDLVQKAKDGGLDAIETYIFWDRHEQVRGRYNFSGNLDFVKFFKTIQEAGLYGIIRIGPYSCAEWNYGGFPVWLH QIPGIEMRTDNAAYKNEMQIFVTKIINVAKEANLFASQGGPIILAQIENEYGDIMWNFKEPGKAYIKWAAQMALAQNIGVPWFMCQQNDAPQPIINTCNG YYCHNFKPNNPKSPKMFTENWIGWFQKWGERAPHRTAEDSAYAVARFFQNGGVFNNYYMYHGGTNFGRTSGGPYIITSYDYDAPINEYGNLNQPKYGHLK FLHE |
Full Sequence |
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Protein Sequence Length: 829 Download |
MRSLSHSIIL LLSLIVLYSC TALEVKYDSN ALIINGERRL IFSGAIHYPR STVDMWPDLV 60 QKAKDGGLDA IETYIFWDRH EQVRGRYNFS GNLDFVKFFK TIQEAGLYGI IRIGPYSCAE 120 WNYGGFPVWL HQIPGIEMRT DNAAYKNEMQ IFVTKIINVA KEANLFASQG GPIILAQIEN 180 EYGDIMWNFK EPGKAYIKWA AQMALAQNIG VPWFMCQQND APQPIINTCN GYYCHNFKPN 240 NPKSPKMFTE NWIGWFQKWG ERAPHRTAED SAYAVARFFQ NGGVFNNYYM YHGGTNFGRT 300 SGGPYIITSY DYDAPINEYG NLNQPKYGHL KFLHEAIKLG EKVLTNYTSR NDKDLGNGIT 360 LTTYTNSVGA RFCFLSNDKD NTDGNVDLQN DGKYFVPAWS VTILDGCNKE VFNTAKVNSQ 420 TSIMEKKIDN SSTNKLTWAW IMEPKKDTMN GRGSIKAHQL LEQKELTLDA SDYLWYMTSV 480 DINDTSNWSN ANLHVETSGH TLHGYVNKRY IGYGHSQFGN NFTYEKQVSL KNGTNIITLL 540 SATVGLANYG ARFDEIKTGI SDGPVKLVGQ NSVTIDLSTG NWSFKVGLNG EKRRFYDLQP 600 RSGVAWNTSS YPTGKPLTWY KTQFKSPLGP NPIVVDLQGL GKGHAWVNGK SIGRYWTSWI 660 TSTAGCSDTC DYRGNYKKEK CNTGCASPSQ RWYHVPRSFL NDDMNTLILF EEIGGNPQNV 720 SFLTETTKTI CANVYEGGKL ELSCQNGQVI TSINFASFGN PQGQCGSFKK GSWESLNSQS 780 MMETSCIGKT GCGFTVTRDM FGVNLDPLSA SKASVKDGIP RLAVQATC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0007 | 47 | 183 | 156 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 7.0e-8 | 742 | 828 | 92 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-16 | 25 | 327 | 351 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-147 | 31 | 337 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 25 | 816 | 824 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27773.1 | 0 | 2 | 828 | 16 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 6 | 828 | 2 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324727.1 | 0 | 55 | 783 | 1 | 743 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326135.1 | 0 | 8 | 828 | 8 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 1 | 828 | 1 | 825 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 29 | 333 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 8e-38 | 23 | 375 | 9 | 369 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 8e-38 | 23 | 375 | 9 | 369 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |