| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g026210.1 |
| Family | GH14 |
| Protein Properties | Length: 651 Molecular Weight: 73855.9 Isoelectric Point: 5.6215 |
| Chromosome | Chromosome/Scaffold: 5 Start: 10509636 End: 10516335 |
| Description | beta-amylase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 221 | 618 | 0 |
| YIKLPAGIINKFCQLMDPEGIRQELIHIKSLNIDGVVVDCWWGIVEGWNSQKYEWSGYRELFSIIREFKLNIQVVMAFHECGGNDSSDALISLPQWVLDI GKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGMIDAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQ HSLRRAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLVDHADNVLSLANLAFEGTKIIVKVPAVYWWYKTPSHAAELTAG YHNPTNQDGYSPVFEVLKKHAVTMKFVCLGFNPSNQEANESLVDPDGLSWQVLNSAWERGLITSGENAIFCYDRERYERLIEMAKPRNDPDHRHFSFF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 651 Download |
| MKNTTEDATS TQDLDPQSDH SSDYLPQPQP RRLRGFAATA AGTNSTGKGK KEREKEKERT 60 KLRERHRRAI TSRMLAGLRQ YGNFPLPARA DMNDVLAALA REAGWIVDAD GTTYRQCLPP 120 SNMGSFAARS VESQPSGGTL RTCSVKETLE NQSPGLRIDE CVSPASIDSV LIAERDSKNE 180 NYASVSPINS TDCLEADQLM QDIHSGVHQN DFNCTPYVPV YIKLPAGIIN KFCQLMDPEG 240 IRQELIHIKS LNIDGVVVDC WWGIVEGWNS QKYEWSGYRE LFSIIREFKL NIQVVMAFHE 300 CGGNDSSDAL ISLPQWVLDI GKDNQDIFFT DREGRRNTEC LSWGIDKERV LKGRTGIEVY 360 FDMMRSFRTE FDDLFAEGMI DAVEIGLGAS GELKYPSFSE RMGWRYPGIG EFQCYDKYLQ 420 HSLRRAAKLR GHSFWARGPD NAGHYNSMPH ETGFFCERGD YDNYYGRFFL HWYSQTLVDH 480 ADNVLSLANL AFEGTKIIVK VPAVYWWYKT PSHAAELTAG YHNPTNQDGY SPVFEVLKKH 540 AVTMKFVCLG FNPSNQEANE SLVDPDGLSW QVLNSAWERG LITSGENAIF CYDRERYERL 600 IEMAKPRNDP DHRHFSFFVY QQPSLLQGNV CLSELDFFIK CMHGEMTGNL * 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 1.0e-104 | 218 | 627 | 419 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 2.0e-120 | 218 | 605 | 394 | + beta-amylase | ||
| PLN02801 | PLN02801 | 8.0e-148 | 217 | 645 | 437 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 3 | 650 | 677 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 69 | 650 | 618 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29216.1 | 0 | 60 | 650 | 19 | 610 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_199343.1 | 0 | 60 | 646 | 96 | 684 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002270680.1 | 0 | 3 | 650 | 2 | 668 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304400.1 | 0 | 26 | 647 | 40 | 669 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519919.1 | 0 | 8 | 645 | 3 | 665 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdq_A | 0 | 217 | 607 | 11 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1wds_A | 0 | 217 | 607 | 11 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1wdp_A | 0 | 217 | 607 | 11 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1q6c_A | 0 | 217 | 607 | 11 | 401 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 217 | 607 | 11 | 401 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO807244 | 282 | 369 | 650 | 0 |
| JG649066 | 276 | 262 | 537 | 0 |
| EB439624 | 285 | 264 | 548 | 0 |
| GO367915 | 286 | 229 | 514 | 0 |
| FG987745 | 218 | 239 | 456 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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